Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0050 ATGTTGTTACTTCATACAACCACCAAACCCCATTCTTTGAAAAATTTCATTTTAGTTATTTCTTCATTTTGTGGCACTTATATCCTTGCATCTGTGCTATTACTAGGCACATCAAAGATATTAGAGGTTCATTCTTCATTACAACAAGATGTGTTTGAACCACTCACTCTTGATCATCTTGTGTTTGGAATTGCTTCAACAAATGCTTCATGGCCCACGAGGAAGCAATATACAAAGCTGTGGTGGAAACCCAACAAATTGAGAGGATGTGTATTTGTGGATACTCTCCCACAAGAAAAACAACATGCTAGTAATGATTCATCTCTTCCTCCTCTGTGTATATCAGAAGACTCTTCTCGGTTTCGATACACTTATCGTGGTGGTCTAAGATCAGCAATTCGCGTTGCACGTGTTGTGAAAGAGACTGTGGCATTGAACCATTCTAATGTAAGATGGTATGTGTTTGGAGATGATGACACAATTTTCTTTCCAGAAAATATTGTGAAAATTCTCTCCAAATATGATGATGAGCTTTGGTACTATGTTGGCGCAAACTCTGAGAGTTATAAGCAATCATGGTTCTTTGGTTTTGGAATGGCCTTTGGTGGAGGTGGTTTCGCTATAAGTTCCTCTCTAGCAAAAGTCTTATCCAAAGTTTTTGACTCATGTATTCAAAGGTATCCACATCTATATGGAAGTGATGCCAGAGTGTACTCTTGCATAACAGAATTGGGTGTAACATTAACATATGAACCTGGCTTTCATCAGGTTGATCTACGAGGAAATATCTTTGGCCTGTTGGCTGCACATCCAATAACTCCCTTGTTGTCCTTGCATCACCCAGAGGATACAGATCCAATTTTCCCAAACATGACAAACACAAAAGCTCTGCTACATTTATTTGAAGCATCAAATATTGATTCCCAGAGAATGCTACAACAAACAGTTTGCTATCACAAGCGATATTCTTGGACCATTTCGGTGTCATGGGGCTATGCTGTTCAAGTATTCCCAAGTAATTGGCGTTTACCAGATGTTATTAGTGTGCAGCAAACATTCAGTCAATGGATGAAAGGAGATGCTTTAGCAGGTGCATATACTTTAAGCACAAGACAACTTCACCGTGACCCATGTAAAAGACCCATCATTTTTTATTTATACGATGTATTTTCTGGTAAAGATGGCATTACTAGAAGCAGATATACAAAATCTCTTCAAAATTGCTCCAATGACATTGCATCACAAAAGAAAGTGGAAATGATTAAAGTGTTCACTAATAAGCTAGACCTCAACATGAAACAGTTGCAGAGTCCAAGAAGGCATTGCTGTGATGTATTGCCCTCTAGTGCTTATTACGGGATGGAAATTGCAATTAGAGAATGCAAAGATGAAGAATTGATTTTTATGCACTAA 1413 0.3815 MLLLHTTTKPHSLKNFILVISSFCGTYILASVLLLGTSKILEVHSSLQQDVFEPLTLDHLVFGIASTNASWPTRKQYTKLWWKPNKLRGCVFVDTLPQEKQHASNDSSLPPLCISEDSSRFRYTYRGGLRSAIRVARVVKETVALNHSNVRWYVFGDDDTIFFPENIVKILSKYDDELWYYVGANSESYKQSWFFGFGMAFGGGGFAISSSLAKVLSKVFDSCIQRYPHLYGSDARVYSCITELGVTLTYEPGFHQVDLRGNIFGLLAAHPITPLLSLHHPEDTDPIFPNMTNTKALLHLFEASNIDSQRMLQQTVCYHKRYSWTISVSWGYAVQVFPSNWRLPDVISVQQTFSQWMKGDALAGAYTLSTRQLHRDPCKRPIIFYLYDVFSGKDGITRSRYTKSLQNCSNDIASQKKVEMIKVFTNKLDLNMKQLQSPRRHCCDVLPSSAYYGMEIAIRECKDEELIFMH 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0050 470 Gene3D - 49 314 - -
Lal8g0050 470 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 10 468 - -
Lal8g0050 470 PANTHER FRINGE-RELATED 10 468 - -
Lal8g0050 470 Pfam Protein of unknown function, DUF604 191 443 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0050 Lal-Chr8 424835 427065 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0050 54 435 Glycosyltransferase AT1G05280 53.747 1.95e-155 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0050 - - gmx:100784602 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0036 25 255670 257323 Lal8g0050 8 424835 427065 LSH
Lal10g1293 10 18988542 18990156 Lal8g0050 8 424835 427065 LSH
Lal2g0427 2 2552191 2557395 Lal8g0050 8 424835 427065 PCT
Lal9g0394 9 2616792 2619932 Lal8g0050 8 424835 427065 PCT