Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0427 ATGTTCCACCGAAGAAAAAAAGAACCTAGTAGCTTATTACCTCTCTCAGAGTCAAACTCAGATTTAGAAATGCCAATGCCTCCTTCTCACAGTTCCAGCTCTGTCAGAAACTCAACAACATCATTTTTCTCTTTCACTCTTTCCTTCAAATCATTCCTTCTCACCCTTTCCCTTATCCTTAACCTCTATCTTCTTCTAAGTCTGTGGGCCCCATCCTTTGTTCCTTTAAACCCCATCCCCACCCCAACAACCACGCGCGTATCCTCCTTCACCCCTACCACGCGCCGTCATATTCTATTCGCTATCGCCTCCTCCTCCCTCTCCTGGCCCCGCCGCCACCCATACCTCCGCCTCTGGTACTCTCCCAATACCACACGCGCCGTTGCCTTCCTCGACTCTCCCCCTCTCAACAACACTTCTTCTTCTTCTTCTTCCTCTTCCCTCCCGCCGGTGATCATATCCAGTGACACCTCCGGCTTCCCCTACACCTTCCACGGTGGTCTCCGCTCCGCGATCCGCGTCGCGCGTGTCGTCAAGGAAGCAGTGGATCGCAACGAATCGGACGTGCGGTGGTTCGTGTTCGGTGATGATGACACAGTGTTTTTTGTGGAAAACGTGGTGAAGGTTCTATCAAAGTACGATCACGATCAATGGTTATACGTAGGGGGAAATTCGGAGAGCTACGATCAGAATGTGAAGTACAGTTTTGAGATGGCGTTTGGGGGTGGAGGATTTGCTATAAGTCACTCGCTTGGTAGGGTTTTGAGTAGGGTTTTGGATTCGTGTTTGAAAAGATATGGCCATTTGTATGGTAGTGATTCTAGGATTTATTCTTGTGTTGCTGAACTTGGTGTTGGCCTAACCCATGAACCTGGGTTTCATCAGTTAGATATGCGGGGGAATTTGTTCGGGATGCTGGCTGCACATCCCTTATCTCCTTTGTTGTCGCTTCATCACTTGGACGTGGTGGAGCCTCTCTTCCCTAGCATGAGCAAAACACAAGCTTTGAAATATCTTATGGCTGCTGCGAACGTTGATCCTGCCAGGATCTTGCAACAAACTGTCTGCTATGATCAATCCAATTCTTTGACTTTCTCAGTTTCTTGGGGTTTTGCTATCCAGCTTTATCAAGGCAATGAACTTCTGCCAGATCTCCTTTCAGTACAGAAAACTTTTGTGCCATGGAAGAGGGGTAGTAAAGTTGATGCCAATTTTATGTTTAACACAAGAGACTATCATAGAGATCCTTGTAAAAGACCTTCAGTTTTTTTCTTCAAAAGTGTTACATCTGATGAAAGGGGCATTTGGAGCAGTTACGCTAGGCATGATGTTGAAAACTGTTTTGAATCATATCCTCTAAAACAGCTGAAGCAGATAATAGTTTTTTCAACGAAGCTAGAGCCTAATATTCAACAGATGAAAGCTCCCCGTCGCCAGTGCTGCAATGTTTTGCCATCTTCTAATGAGTCGATCAGTATTCATATCAGACAGTGTGGAATGAATGAACTGATCTCCATGCGATTATAG 1527 0.4604 MFHRRKKEPSSLLPLSESNSDLEMPMPPSHSSSSVRNSTTSFFSFTLSFKSFLLTLSLILNLYLLLSLWAPSFVPLNPIPTPTTTRVSSFTPTTRRHILFAIASSSLSWPRRHPYLRLWYSPNTTRAVAFLDSPPLNNTSSSSSSSSLPPVIISSDTSGFPYTFHGGLRSAIRVARVVKEAVDRNESDVRWFVFGDDDTVFFVENVVKVLSKYDHDQWLYVGGNSESYDQNVKYSFEMAFGGGGFAISHSLGRVLSRVLDSCLKRYGHLYGSDSRIYSCVAELGVGLTHEPGFHQLDMRGNLFGMLAAHPLSPLLSLHHLDVVEPLFPSMSKTQALKYLMAAANVDPARILQQTVCYDQSNSLTFSVSWGFAIQLYQGNELLPDLLSVQKTFVPWKRGSKVDANFMFNTRDYHRDPCKRPSVFFFKSVTSDERGIWSSYARHDVENCFESYPLKQLKQIIVFSTKLEPNIQQMKAPRRQCCNVLPSSNESISIHIRQCGMNELISMRL 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0427 508 MobiDBLite consensus disorder prediction 1 35 - -
Lal2g0427 508 Pfam Protein of unknown function, DUF604 230 481 IPR006740 -
Lal2g0427 508 PANTHER GLYCOSYLTRANSFERASE 41 506 - -
Lal2g0427 508 PANTHER FRINGE-RELATED 41 506 - -
Lal2g0427 508 Gene3D - 87 324 - -
Lal2g0427 508 MobiDBLite consensus disorder prediction 12 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0427 Lal-Chr2 2552191 2557395 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0427 50 506 Glycosyltransferase AT4G15240 59.483 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0427 - - aip:107629947 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0427 2 2552191 2557395 Lal9g0394 9 2616792 2619932 LSH
Lal2g0427 2 2552191 2557395 Lal25g0036 25 255670 257323 PCT
Lal2g0427 2 2552191 2557395 Lal10g1293 10 18988542 18990156 PCT
Lal2g0427 2 2552191 2557395 Lal8g0050 8 424835 427065 PCT