Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0308 ATGTCTTCTTCATCGGAGCGCGTAGATCTAGACGGCAACCCCATAAAGCCGATGACAATTTGTATGATCGGCGCCGGAGGTTTCATTGGGTCCCACCTTTGCGAGAAGATAATGAATGAGACACCACATAAGGTTCTCGCTTTGGATGTCTACAATGACAAGATCAAACACCTCTTGGAACCCGATAACCTTCCTTGGCACGGTCGCATCCACTTCCACCGCCTCAATATCAAACACGATTCTAGACTTGAAGGTCTCATCAATATGTCAGATCTGACTATAAATCTGGCTGCAATTTGTACTCCGGCGGATTATAATACACGACCTCTTGATACAATTTACAGCAATTTCATTGATGCGCTTCCTGTGGTGAAGTACTGTTCGGAGAATAACAAGAGGCTCATTCATTTCTCTACTTGTGAAGTGTATGGGAAAACGATTGGGAGCTTTCTCCCTAAAGATAGTCCTCTTCGTCAGGATCCTGCTTACTATATTCTTAAAGAAGACGAGTCTCCATGCATTTTTGGTTCAATTGAAAAGCAGAGGTGGTCCTATGCATGTGCAAAGCAGCTGATAGAGAGGCTGATTTATGCTGAGGGTGCTGAAAATGGTATGGACTTCACAATTGTGAGGCCTTTCAACTGGATTGGACCTCGGATGGATTTCATTCCCGGCGTTGATGGTCCAAGTGAAGGCGTGCCTCGTGTTCTAGCATGCTTTAGCAATAATCTTCTCAGAGGGGAGCCCCTCAAGCTTGTGGATGGTGGCCAATCCCAACGAACCTTTGTTTACATTAAGGATGCTATTGAAGCTGTCTTATTAATGATTGAAAATCCTGCCAGGGCCAATGGCCATATCTTCAATGTTGGTAACCCAAACAATGAGGTTACAGTTAGGCAGCTAGCTGAAATGATGATTCAGGTTTACTCAAAGGTAAGTGGAGAACAAACTCCTGAGATACCTACAATTGATGTGAGCTCCAAAGAGTTTTATGGAGAGGGATATGATGACAGTGACAAGAGAATTCCTGACATGACCATAATAAACAAGCAGCTAGGATGGAATCCCAAGACTTCACTTTGGGATCTGCTTGAATCTACTCTTACCTATCAGCACAGGACATATGCTGAAGCCATCAAGAAAGTCATTGCTAAACCCATTGCAAGTTAA 1170 0.4376 MSSSSERVDLDGNPIKPMTICMIGAGGFIGSHLCEKIMNETPHKVLALDVYNDKIKHLLEPDNLPWHGRIHFHRLNIKHDSRLEGLINMSDLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYILKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGMDFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRGEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMIQVYSKVSGEQTPEIPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHRTYAEAIKKVIAKPIAS 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0308 389 Gene3D - 17 380 - -
Lal9g0308 389 PANTHER - 7 388 - -
Lal9g0308 389 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 7 388 - -
Lal9g0308 389 CDD Arna_like_SDR_e 19 374 IPR045869 GO:0016831
Lal9g0308 389 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 18 372 IPR036291 -
Lal9g0308 389 Pfam NAD dependent epimerase/dehydratase family 20 290 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0308 Lal-Chr9 1988588 1991654 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0308 K12449 - gmx:100792879 750.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0308 9 1988588 1991654 Lal9g0308 9 1988588 1991654 ECH
Lal1g0412 1 2543755 2544762 Lal9g0308 9 1988588 1991654 LSH
Lal2g0327 2 1979588 1983279 Lal9g0308 9 1988588 1991654 LSH
Lal25g0216 25 1475608 1482419 Lal9g0308 9 1988588 1991654 PCT
Lal10g1205 10 18464731 18472181 Lal9g0308 9 1988588 1991654 PCT
Lal9g0308 9 1988588 1991654 Lal25g0216 25 1475608 1482419 PCT
Lal9g0308 9 1988588 1991654 Lal10g1205 10 18464731 18472181 PCT