Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0216 ATGGGAACTCACCCCATCAACGCAATCACTATATGCATGATCGGTGCTGGTGGGTTCATAGGGTCCCACCTATATCAGAAGCTGATGCATGAGACACCACACAAGATTCAAAATCAAACATCTCTTGGAACCAGCCACTCTCCATGGCTTGATCGAATCCAATTCCATCGCCTCAATGTCAAACAAGATTCAAGACTTGAAGGTCTCATCAAAATGGCTTATCTTGTGAAGCACTGTTCTGAAAACAACAAGCGTCTCATTAATTTCTCTACTTGTGAAGTGTATGGAAAAACAATTGAGATAGCCCTTATCGTCAGGTTTACTCTCAAGGTAAGTGGAGAACCTTCTTTGGAAAGTCCTACAATTGATGTTAGCTCCAAAGAATTTTATGGTGAGGGATATGATGATAGTGATAAAAGAATTCTCAACATGAACATAATTAACAAGCAGCTTGGTTGGAACCTACTTGAATCCACTCTCACCTATCAGCACAAGACTTATGCTGAAACAATTAAGAAAGTCATTGCAAAACCTGTTGCAAGTTAA 546 0.3993 MGTHPINAITICMIGAGGFIGSHLYQKLMHETPHKIQNQTSLGTSHSPWLDRIQFHRLNVKQDSRLEGLIKMAYLVKHCSENNKRLINFSTCEVYGKTIEIALIVRFTLKVSGEPSLESPTIDVSSKEFYGEGYDDSDKRILNMNIINKQLGWNLLESTLTYQHKTYAETIKKVIAKPVAS 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0216 181 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 104 180 - -
Lal25g0216 181 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 3 75 - -
Lal25g0216 181 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 77 100 - -
Lal25g0216 181 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 98 IPR036291 -
Lal25g0216 181 Pfam NAD dependent epimerase/dehydratase family 11 78 IPR001509 -
Lal25g0216 181 Gene3D - 7 80 - -
Lal25g0216 181 Gene3D - 101 177 - -
Lal25g0216 181 PANTHER - 104 180 - -
Lal25g0216 181 PANTHER - 3 75 - -
Lal25g0216 181 PANTHER - 77 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0216 Lal-Chr25 1475608 1482419 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0216 K12449 - ming:122089986 124.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0216 25 1475608 1482419 Lal25g0216 25 1475608 1482419 ECH
Lal25g0216 25 1475608 1482419 Lal10g1205 10 18464731 18472181 LSH
Lal25g0216 25 1475608 1482419 Lal1g0412 1 2543755 2544762 PCT
Lal25g0216 25 1475608 1482419 Lal2g0327 2 1979588 1983279 PCT
Lal25g0216 25 1475608 1482419 Lal9g0308 9 1988588 1991654 PCT
Lal1g0412 1 2543755 2544762 Lal25g0216 25 1475608 1482419 PCT
Lal2g0327 2 1979588 1983279 Lal25g0216 25 1475608 1482419 PCT
Lal9g0308 9 1988588 1991654 Lal25g0216 25 1475608 1482419 PCT