Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0412 CTGCAGAATCTTCTCAGAGGAGAGCCCCTCAAGCTTGTGAATGGTGGCCAATCCCAGCGAACCTTTGTTTACATTAAGGATGCTGTTGAAGCTTTCTTATTGATGATTGTAGGTGAAATGGTCATATCTTCAACGTGGGTAACCCAAACAATGAGGTTACACTTAGTTGAAATAATGATTCAGGTGAAGGTAAGTGGAGAAGAAACACCTATAATTAATGTGAGTTCGAAGGAATTTTATGGTGAGAGATATGATAATAGGGATAAAAGAATTCCCTACCTGACCATAATAAATGGTTGGAACCCTAAGACTTCTCTTTGGGACATGCTTGAATCTACTCTCACCTATTAG 351 0.3932 MQNLLRGEPLKLVNGGQSQRTFVYIKDAVEAFLLMIVGEMVISSTWVTQTMRLHLVEIMIQVKVSGEETPIINVSSKEFYGERYDNRDKRIPYLTIINGWNPKTSLWDMLESTLTY 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0412 116 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 115 IPR036291 -
Lal1g0412 116 Gene3D - 1 116 - -
Lal1g0412 116 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 2 116 - -
Lal1g0412 116 Pfam NAD dependent epimerase/dehydratase family 2 36 IPR001509 -
Lal1g0412 116 PANTHER - 2 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0412 Lal-Chr1 2543755 2544762 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0412 K12449 - gmx:100811095 144.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0412 1 2543755 2544762 Lal1g0412 1 2543755 2544762 ECH
Lal1g0412 1 2543755 2544762 Lal2g0327 2 1979588 1983279 LSH
Lal1g0412 1 2543755 2544762 Lal9g0308 9 1988588 1991654 LSH
Lal25g0216 25 1475608 1482419 Lal1g0412 1 2543755 2544762 PCT
Lal10g1205 10 18464731 18472181 Lal1g0412 1 2543755 2544762 PCT
Lal1g0412 1 2543755 2544762 Lal25g0216 25 1475608 1482419 PCT
Lal1g0412 1 2543755 2544762 Lal10g1205 10 18464731 18472181 PCT