Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1079 ATGGTGGTGAAGAAAGCAAGGATTGTGATTATTGGAGCAGGAATGGCAGGTCTCACTGCAGCCAACAAGCTCCACAGTGTGACAGCCTCAAAAGACATGTTTGAGTTATGTGTTGTAGAAGGTGGAACCAGAATTGGTGGCAGAATCAATACCTCAGAGTTTGGTGGTGACAAGATAGAGATGGGTGCTACTTGGATCCATGGAATTGGTGGCAGCCCAATTCACAAAATTGCTCAACAAATCCATTCTTTGGAATCTGACCAACCTTGGGAGTGCATGGATGGGAACTTAGATGAGCCTACAACCATTGCTGAAGGTGGCTTTATCATAAAACCTTCAATTGTTGAACCTATCACAAAGCTTTTCAATACTCTCATGAATCATGCTCAAGGAAAGAAGCTCAGTGATTCAGCTTCAGACACTGCAAAAAGTGAACTTCACAGTTATTATCATAAGCTGGCTGCTAAAGCTTCCAACATGTCAACAACAAAAAGTGTTGGTTCTTTTCTTAGACAAGGCCTTGATGGTTACTGGAGTTCTGGTTCAGAAAAGAATCAAGAGGAGGACCTTAAAGGGTATGGGAAATGGAGCAGGAAATTACTTGAAGAAGGAATCTTTACAATGCATGAGAATACTCAGAGGACATTTACATCTTCTGGTGACCTTTTGACTCTAGATTATAGAGCAGAAAGTGAATACCAAATGTTTCCAGGAGAAGAAATCACAATTGCTAAAGGTTACTTGAGCATAATTGAGTCTTTAGCTTCTGTGCTACCACCTGGAACAGTTCAGTTAGGTAGAAAAGTTACAAGGATTGAGTGGCAGCCTGAGAGAAATCATGAGCCAATGAATGTGGAAAATGGTTATTGCTCTAGGCCTGTGAAGTTACATTTCTATGATGGTTCAGTTATGTGTGCTGATCATGTCATTGTCACAGTTTCACTTGGAGTACTAAAAGCTTCTATTCATGATGATTCAGGTATGTTCTATCCACCTCTTCCTTCTTTCAAGGCTAAGGCAATTTCAAGGCTTGGTTTTGGTGTTGTTAATAAGTTGTTTATGCAATTAAGTCCAACATATGAAAGAAAACATGAACAATCAAAAGGGTGGTTCCCTTCATTGGAAATGGTTTTTCATTCACCTCACTCTGAGATGAGGCACAAGAAAATACCCTGGTGGATGAGAAGAACAGCATCCCTTTGTCCCATATACAATAATTCTAGTGTCCTCTTATCTTGGTTTGCTGGTGAAGAAGCATTAGCACTTGAGTCACTCAAAGATGAAGACATCATTGATGGGGTTTCAACCACACTTTCAACCTTTCTATCTCATAAACTTTCTATCATTGATAAGTCTCATGAAAATGAAGTGAAATTCAGTAAAGTGTTGAAGACACAGTGGGGAACAGATCCTTTATTTTTAGGCTCATACAGTTATGTTGCAGTAGGATCAAGTGGTGATGATTTAGATGCAATGGCTGAACCATTGCCAAAAGATAAGTCCTTGGCTTCACCACCACTTCAAATTTTGTTTGCTGGGGAAGCAACTCACAGAACCCATTATTCTACAACTCATGGAGCTTACTTCAGTGGTCTTAGGGAAGCTAATAGGCTTCTTCAACATTATCACTATCTTGGAATTTATAACTAG 1650 0.3976 MVVKKARIVIIGAGMAGLTAANKLHSVTASKDMFELCVVEGGTRIGGRINTSEFGGDKIEMGATWIHGIGGSPIHKIAQQIHSLESDQPWECMDGNLDEPTTIAEGGFIIKPSIVEPITKLFNTLMNHAQGKKLSDSASDTAKSELHSYYHKLAAKASNMSTTKSVGSFLRQGLDGYWSSGSEKNQEEDLKGYGKWSRKLLEEGIFTMHENTQRTFTSSGDLLTLDYRAESEYQMFPGEEITIAKGYLSIIESLASVLPPGTVQLGRKVTRIEWQPERNHEPMNVENGYCSRPVKLHFYDGSVMCADHVIVTVSLGVLKASIHDDSGMFYPPLPSFKAKAISRLGFGVVNKLFMQLSPTYERKHEQSKGWFPSLEMVFHSPHSEMRHKKIPWWMRRTASLCPIYNNSSVLLSWFAGEEALALESLKDEDIIDGVSTTLSTFLSHKLSIIDKSHENEVKFSKVLKTQWGTDPLFLGSYSYVAVGSSGDDLDAMAEPLPKDKSLASPPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHYLGIYN 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1079 549 PANTHER POLYAMINE OXIDASE 5-RELATED 1 545 - -
Lal7g1079 549 Gene3D - 2 166 IPR036188 -
Lal7g1079 549 Gene3D - 488 546 IPR036188 -
Lal7g1079 549 Pfam Flavin containing amine oxidoreductase 15 539 IPR002937 GO:0016491
Lal7g1079 549 SUPERFAMILY FAD/NAD(P)-binding domain 3 542 IPR036188 -
Lal7g1079 549 Gene3D - 291 484 - -
Lal7g1079 549 SUPERFAMILY FAD-linked reductases, C-terminal domain 345 479 - -
Lal7g1079 549 PANTHER FLAVIN MONOAMINE OXIDASE 1 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1079 Lal-Chr7 16805261 16806910 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1079 K12259 - gmx:100809633 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1079 7 16805261 16806910 Lal7g1079 7 16805261 16806910 ECH
Lal14g1678 14 16985044 16986705 Lal7g1079 7 16805261 16806910 LSH
Lal7g1079 7 16805261 16806910 Lal19g1224 19 15560960 15562618 LSH
Lal7g1079 7 16805261 16806910 Lal17g1540 17 16806820 16808478 PCT
Lal7g1079 7 16805261 16806910 Lal4g1549 4 19673444 19675129 PCT
Lal17g1540 17 16806820 16808478 Lal7g1079 7 16805261 16806910 PCT
Lal4g1549 4 19673444 19675129 Lal7g1079 7 16805261 16806910 PCT