Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1678 ATGGTGGTCAAGAAACCAAAGATTGTGATAATTGGAGCAGGAATGGCAGGTCTTACTGCTGCTAACAAGCTCCACACTGTAACAGGTTCAAAAGACATGTTTGAGTTGTATGTTGTAGAAGGTGGAACAAGGCTTGGTGGCAGAATCAACACCTCAGAGTTTTGTGGTGATAAGATAGAGATGGGTGCTACATGGATCCATGGAATTGGAGGCAGTCCAATTCACAAAATTGCTCAACAAATTCATTCATTGGAGTCTGAACAGCCTTGGGAGTGCATGGATGGGAACTTAGATGAGCCTACCACCATTGCTGAAGGTGGCTTCATCCTAAACCCTTTAATTGTTGACCCTTCCACCAAGCTTTTCAATACTCTCATGGATCATGCTCAGGGGAAGAAGCTAAATGATCCAGTTTCAGACACTGAAAAAAGTGAACTTTACAGTTATTATCATAAGCTGGCTGCTAAAGCTTCCAACTTGTCAGCAACAAGTGTTGGCTCTTTTCTCAGACAAGGCCTTGATGATTACTGGAGTTCAGGTTCAGAAAAGAAGCAAGAAGAGCTCAAAGGTTATGGGAAATGGAGCAAGAAGTTGCTTGAAGAAGGAATCTTTGCAATGCATGAGAATGCTCAGAGGACATATACATCTGCTGCTGACCTTTTGAGTCTAGATTATAGAGCAGAAAGTGAGTACCAAATGTTTCCAGGCGATGAAATCACAATTGCTAAAGGCTACTTGAGCATAATTGAGTCTTTAGCTTCTGTGTTGCCACCTGGAACAGTTCAGTTAGGTAGAAAAGTCACAAAGATTGAATGGAAGCCTGAGAGAAAAAACCATGAGCCAATGAATGTGGATAATGGTTACTGTTCTAGGCCTGTGAAGCTACATTTCAATGATGGCTCAGCTATGTCAGCTGATCATGTCATTATCACAGTTTCACTAGGAGTACTAAAAGCTGCTATTCATGATGATTCAGGTATGTTCTATCCTCCTCTGCCCTCTTTCAAGTCTGAGGCAATTTCAAGGCTTGGTTTTGGTGTTGTTAATAAGATATTTATGCAATTGAGTCCAACACATGAAAGAAGAAATGAACACTCTAAAGGGTTGTTCCCTTCATTGCAAATGGTTTTTCATTCACCTCAATCTGAGATGAGGCACAAGAAAATACCATGGTGGATGAGAAGAACTGCTACCCTTTGTCCAATATACAATAATTCCAGTGTCCTCCTATCTTGGTTTGCTGGTAAAGAAGCATTAGCGCTTGAGTCACTCAGAGATGAAGAGATCATTCAAGGGGTTTCAACCACACTTTCAAGCTTTCTATCTCATAAATTTTGCAATGGTAATGTGAATTCTGAGGATAAGTCTCAAGGATATGGAGTGAAATTCAGTAAAGTTTTGAAGACCAAATGGGGAACGGATCCTTTATTTTTAGGCTCATACAGTTATGTGGCAGTGGGATCAAGTGGAGATGATTTAGATGCAATGGCAGAACCATTGCCAAAAGATAAGCCTTTAGCTTCACCACCACTTCAAATTTTGTTTGCTGGGGAAGCAACTCATAGAACCCATTATTCTACAACTCATGGAGCTTACTTCAGTGGTCTTAGGGAAGCCAATAGGCTTCTTCAACATTATCATTGCCTTGGGATTTATAACTAG 1662 0.4073 MVVKKPKIVIIGAGMAGLTAANKLHTVTGSKDMFELYVVEGGTRLGGRINTSEFCGDKIEMGATWIHGIGGSPIHKIAQQIHSLESEQPWECMDGNLDEPTTIAEGGFILNPLIVDPSTKLFNTLMDHAQGKKLNDPVSDTEKSELYSYYHKLAAKASNLSATSVGSFLRQGLDDYWSSGSEKKQEELKGYGKWSKKLLEEGIFAMHENAQRTYTSAADLLSLDYRAESEYQMFPGDEITIAKGYLSIIESLASVLPPGTVQLGRKVTKIEWKPERKNHEPMNVDNGYCSRPVKLHFNDGSAMSADHVIITVSLGVLKAAIHDDSGMFYPPLPSFKSEAISRLGFGVVNKIFMQLSPTHERRNEHSKGLFPSLQMVFHSPQSEMRHKKIPWWMRRTATLCPIYNNSSVLLSWFAGKEALALESLRDEEIIQGVSTTLSSFLSHKFCNGNVNSEDKSQGYGVKFSKVLKTKWGTDPLFLGSYSYVAVGSSGDDLDAMAEPLPKDKPLASPPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCLGIYN 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1678 553 Pfam Flavin containing amine oxidoreductase 15 543 IPR002937 GO:0016491
Lal14g1678 553 Gene3D - 276 488 - -
Lal14g1678 553 PANTHER POLYAMINE OXIDASE 5-RELATED 1 550 - -
Lal14g1678 553 SUPERFAMILY FAD-linked reductases, C-terminal domain 344 483 - -
Lal14g1678 553 PANTHER FLAVIN MONOAMINE OXIDASE 1 550 - -
Lal14g1678 553 Gene3D - 2 148 IPR036188 -
Lal14g1678 553 Gene3D - 492 549 IPR036188 -
Lal14g1678 553 SUPERFAMILY FAD/NAD(P)-binding domain 3 546 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1678 Lal-Chr14 16985044 16986705 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1678 K12259 - gmx:100783032 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1678 14 16985044 16986705 Lal14g1678 14 16985044 16986705 ECH
Lal14g1678 14 16985044 16986705 Lal7g1079 7 16805261 16806910 LSH
Lal14g1678 14 16985044 16986705 Lal19g1224 19 15560960 15562618 LSH
Lal14g1678 14 16985044 16986705 Lal17g1540 17 16806820 16808478 PCT
Lal14g1678 14 16985044 16986705 Lal4g1549 4 19673444 19675129 PCT
Lal17g1540 17 16806820 16808478 Lal14g1678 14 16985044 16986705 PCT
Lal4g1549 4 19673444 19675129 Lal14g1678 14 16985044 16986705 PCT