Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1224 ATGGTGCTAAAGAAACCAAGGATTGTGATAATTGGAGCAGGAATGGCAGGTCTAACTGCTGCCAACAAACTCCACACCATGAATGCCTCAAAAGACATGTTTGAGTTGTGTGTTGTAGAAGGTGGAACCAGGATTGGTGGAAGAATCAACACCTCAGAGTTTGGTGGTGATAAGGTAGAGATGGGTGCTACTTGGATCCATGGAATTGGAGGCAGTCCAATTCATAAAATTGCTCAACAAATCCATTCACTAGAGTCTGATCAGCCTTGGGAGTGCATGGATGGTAACTTGGATGAGCCTACAACCATTGCTGAAGGTGGCTTCATCCTAAACCCTTCTATTGTTGACCCTATCACAAAGCTTTTCAATAGTCTTATGGATCATGCTCAAGGAAAGAATCTGATTGATTCAGTTTCAGACACAGAAAGAAATGAACATTGCAGTTATTATCATAAGCTGGCTGCTAAAGCTTCAAACATGTCAGTAGCAACAAGTGTTGGTTCTTTTCTCAGACAAGGCCTTGATGCTTATTGGAGTTCAGGTTCAAAGGAGCAAGAGGAGGATCTCAAAGGGTATGGAAAATGGAGCAGGAAGTTGCTTGAAGAAGGAATCTTTGCAGTGCATGAGAACATTCAGAGGACATATACATCTGCTGGTGACCTTTTGAGCCTAGATTATAGAGCAGAAAGTGAATACCAAATGTTTCCAGGTGAAGAAATCACAATTGCTAAAGGCTACTTGAGCATAATTGAGTCTTTAGCTTCTGTGCTTCCACCTGGAACAGTTCAGTTAGGTAGAAAAGTCACAAAGATTGAATGGCAGCCTGAGAGAAATCATGACCCAATGAATGTGGAAAATGGTTACTGTTCTAGGCCAGTGAAGCTACATTTCTATGATGGTTCTGTTATGTATGCTGATCATGTCATTGTCACAGTTTCACTTGGAGTACTAAAAGATGCTATTCATCATGATTCAGGTATGTTCTATCCTCCTCTGCCTTCTTTCAAGGCTGAGGCAATTTCAAGGCTTGGTTTTGGTGTTGTTAATAAGTTGTTTATGCAATTAAGTCCAACACATGAAAGAAAAGATGAACACTCTAGAGGGTGTTTCCCTTCTTTGCAAATGGTTTTTCATTCACCTCACTCTGAGATGAGGCACAAGGAAATACCCTGGTGGATGAGGAAAACAGCTACCCTTTGTCCCATTCACAATAATTCTAGTGTCCTACTATCTTGGTTTGCTGGTGAAGAAGCACTAGCGCTTGAGTCACTCAAAGATGAAGAAATCATTCATGGTGTTTCAACCACACTTTCAACCTTTCTATCTCATAAACTACACAATGAGAATGTGAGTTCTGAGGATAAGTTTCATGGATATGATGAAGTGAAACTCAGTAAGGTTTTGAAGACACAATGGGGAACAGACCCTTTATTTTTAGGCTCATACAGTTATGTGTCAATGGGATCAAGTGGTGATGATTTAGATTTAATGGCAGAGCCATTGCCAAAAGATAAATCTTTAGCTTCACCACCACTTCAAATTTTGTTTGCTGGTGAAGCAACTCACAGAACCCATTATTCTACAACTCATGGAGCTTACTTTAGTGGTCATAGGGAAGCTAATAGGCTTCTTCAATATTATCACTGCCTTGGGATTTAA 1659 0.4039 MVLKKPRIVIIGAGMAGLTAANKLHTMNASKDMFELCVVEGGTRIGGRINTSEFGGDKVEMGATWIHGIGGSPIHKIAQQIHSLESDQPWECMDGNLDEPTTIAEGGFILNPSIVDPITKLFNSLMDHAQGKNLIDSVSDTERNEHCSYYHKLAAKASNMSVATSVGSFLRQGLDAYWSSGSKEQEEDLKGYGKWSRKLLEEGIFAVHENIQRTYTSAGDLLSLDYRAESEYQMFPGEEITIAKGYLSIIESLASVLPPGTVQLGRKVTKIEWQPERNHDPMNVENGYCSRPVKLHFYDGSVMYADHVIVTVSLGVLKDAIHHDSGMFYPPLPSFKAEAISRLGFGVVNKLFMQLSPTHERKDEHSRGCFPSLQMVFHSPHSEMRHKEIPWWMRKTATLCPIHNNSSVLLSWFAGEEALALESLKDEEIIHGVSTTLSTFLSHKLHNENVSSEDKFHGYDEVKLSKVLKTQWGTDPLFLGSYSYVSMGSSGDDLDLMAEPLPKDKSLASPPLQILFAGEATHRTHYSTTHGAYFSGHREANRLLQYYHCLGI 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1224 552 SUPERFAMILY FAD/NAD(P)-binding domain 4 547 IPR036188 -
Lal19g1224 552 PANTHER FLAVIN MONOAMINE OXIDASE 1 551 - -
Lal19g1224 552 Pfam Flavin containing amine oxidoreductase 15 544 IPR002937 GO:0016491
Lal19g1224 552 Gene3D - 94 490 - -
Lal19g1224 552 PANTHER POLYAMINE OXIDASE 5-RELATED 1 551 - -
Lal19g1224 552 SUPERFAMILY FAD-linked reductases, C-terminal domain 344 484 - -
Lal19g1224 552 Gene3D - 8 542 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1224 Lal-Chr19 15560960 15562618 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1224 K12259 - gmx:100783032 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1224 19 15560960 15562618 Lal19g1224 19 15560960 15562618 ECH
Lal14g1678 14 16985044 16986705 Lal19g1224 19 15560960 15562618 LSH
Lal7g1079 7 16805261 16806910 Lal19g1224 19 15560960 15562618 LSH
Lal19g1224 19 15560960 15562618 Lal17g1540 17 16806820 16808478 PCT
Lal19g1224 19 15560960 15562618 Lal4g1549 4 19673444 19675129 PCT
Lal17g1540 17 16806820 16808478 Lal19g1224 19 15560960 15562618 PCT
Lal4g1549 4 19673444 19675129 Lal19g1224 19 15560960 15562618 PCT