Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1549 ATGGTGGCAAAGAAACCAAAGATTGTAATAATTGGTGCAGGAATGGCAGGACTCACAGCAGCCAACAAGCTCTACACTGCAACTTCCTCAAAGGATTTGTTTGAGCTTTGTGTTGTTGAAGGTGGAACAAGGATTGGTGGAAGAATCAACACTTCAGAGTTTGGTGGTGATAGGATTGAGATGGGTGCTACTTGGATCCATGGAATTGGAGGCAGCCCAATTCACAAGATTGCTCAAGAAATCCATTCACTACACTCTGACCAACCTTGGGAATGCATGGATGGTAATTCAGATGTAAACAACACAATCACCATTGCTGAAGGTGGCTACCAACTTCACCCTTCAATTGTTGACCCTGTCACAAAGCTTTTCAAGAACTTGATGGACTATTGTCAAGGGAAGAACCTCACTGAAGATGGAGAACTTGAGAGTAGTTATTATTATAACCTGGCTGCTAAAGCTGCTTCCAATGGTGGTGGTGGTGGTGGTGGCTCTGGGAGTCTTAGTGTTGGTTCTTTTCTTAGACAAGGTCTTGATGCATATTTTGGTTCTGTGAAAGAGCAAGATGAGGTTAAAGGGTATGGGAATTGGAGCAGGAATTTGCTTGAAGAAGCTGTTTTTGCAATGCATGAGAACACTCAGAGGACTTATACATCAGCTGGTGATTTGTTGAGTCTAGATTATGCTGCTGAGAGTGAGTACAGAATGTTTCCAGGTGAAGAAATCACTATTGCCAAAGGGTACTTGAGTATCATTGACTCCTTAGCTTCTGTGCTACCACCTGGTGTAGTTCAGTTAGGTAAGAAAGTCACAAAGATTAAGTGGCATGGTGATGATGAAAGGAAGATTGTGGAAAATGGTTGTTGTTTTAGGCCTGTGAAGCTTCATTTCTGTGATGGTTCTATGATGTTTGCTGATCATGTTATTGTCACTGTTTCACTAGGGGTGTTAAAAGCTGCTATTAGTGATGATGCTGATTCAGGTATCTTTTTCTATCCACCACTTCCACCTTCCAAGGTTGAAGCAATTTCAAGGCTTGGTTTTGGTGTTGTTAACAAATTGTTTATGCAATTGAGTCCAAATACACAACAAGAGGAACAACAGTTTCCATTCTTGCAAATGGTTTTTCATTCACCTCAATCTGAGATGAGGCACAAGAAAATACCATGGTGGATGAGAAGAACAGATACCCTTTTCCCTATTTACAACAATTCTAGTGTTCTACTATCTTGGTTTGCTGGTGAAGAAGCATTAGCACTTGAGTCACTCAATGATGAAGAGATTCTCAATGCAACTTCAACAACATTTTCAACCTTTCTGTCATATTACAAGTGGAAAAAGGGTACCAGCTTACATAAATTATGCAATGGGAATGTGAATTCTGATGATAAGTCTCACCAAAATGAAGTCAAATTCAGTAAAGTATTGAAGAGCAAATGGGGTACTGATCCTTTGTTTTTAGGGTCATATAGTTATGTTGCAGTAGGATCAAGTGGTGATGATTTAGATACAATGGCTGAGCCATTACCAAAAGATAGCAATTTTCAGAATTCTGTTACATTTCCACTTCAAATTTTGTTTGCAGGTGAAGCAACTCACAGAACTCATTATTCTACAACTCATGGTGCTTACTTCAGTGGTCTTAGGGAAGCTAATAGGCTTCTTCAACATTATCACTACAACTAG 1686 0.3986 MVAKKPKIVIIGAGMAGLTAANKLYTATSSKDLFELCVVEGGTRIGGRINTSEFGGDRIEMGATWIHGIGGSPIHKIAQEIHSLHSDQPWECMDGNSDVNNTITIAEGGYQLHPSIVDPVTKLFKNLMDYCQGKNLTEDGELESSYYYNLAAKAASNGGGGGGGSGSLSVGSFLRQGLDAYFGSVKEQDEVKGYGNWSRNLLEEAVFAMHENTQRTYTSAGDLLSLDYAAESEYRMFPGEEITIAKGYLSIIDSLASVLPPGVVQLGKKVTKIKWHGDDERKIVENGCCFRPVKLHFCDGSMMFADHVIVTVSLGVLKAAISDDADSGIFFYPPLPPSKVEAISRLGFGVVNKLFMQLSPNTQQEEQQFPFLQMVFHSPQSEMRHKKIPWWMRRTDTLFPIYNNSSVLLSWFAGEEALALESLNDEEILNATSTTFSTFLSYYKWKKGTSLHKLCNGNVNSDDKSHQNEVKFSKVLKSKWGTDPLFLGSYSYVAVGSSGDDLDTMAEPLPKDSNFQNSVTFPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHYN 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1549 561 Pfam Flavin containing amine oxidoreductase 15 555 IPR002937 GO:0016491
Lal4g1549 561 SUPERFAMILY FAD-linked reductases, C-terminal domain 347 492 - -
Lal4g1549 561 Gene3D - 506 561 IPR036188 -
Lal4g1549 561 Gene3D - 2 140 IPR036188 -
Lal4g1549 561 SUPERFAMILY FAD/NAD(P)-binding domain 1 558 IPR036188 -
Lal4g1549 561 PANTHER FLAVIN MONOAMINE OXIDASE 1 560 - -
Lal4g1549 561 PANTHER POLYAMINE OXIDASE 5-RELATED 1 560 - -
Lal4g1549 561 Gene3D - 297 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1549 Lal-Chr4 19673444 19675129 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1549 K12259 - gmx:100783032 862.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1549 4 19673444 19675129 Lal4g1549 4 19673444 19675129 ECH
Lal17g1540 17 16806820 16808478 Lal4g1549 4 19673444 19675129 LSH
Lal14g1678 14 16985044 16986705 Lal4g1549 4 19673444 19675129 PCT
Lal7g1079 7 16805261 16806910 Lal4g1549 4 19673444 19675129 PCT
Lal19g1224 19 15560960 15562618 Lal4g1549 4 19673444 19675129 PCT
Lal4g1549 4 19673444 19675129 Lal14g1678 14 16985044 16986705 PCT
Lal4g1549 4 19673444 19675129 Lal7g1079 7 16805261 16806910 PCT
Lal4g1549 4 19673444 19675129 Lal19g1224 19 15560960 15562618 PCT