Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0177 ATGTCTATAGTCATAGATGATATAAAATCAAGAGCTGAAATATATCATGGAGATGAGCTATGTCAATTGAAATCAAAGGAACTACTCAAAGAAATAGCCCTACCCAATGGTCTATTACCCTTAAAAGATATTGAAGAATGCGGTTATGATAGAGAATCTGGGTATGTATGGTTGAAGCAAAAGAAAAGCTATACACATAAGTTTGAGAAGATTGGTAAGTTAGTGTCCTATGGTTCTGAGGTTAGTGCCTATGTTGAGAATGGGAAAATTAAGAAGCTTTGTGGTGTGAAAACAAAAGAGCTTTTGCTTTGGATTACTTTGAGTGATATTTATGTTGATGATCCACCAAATGGTAAAATCACTTTTAAAACACCTTCTGGGTTATATAGGTCATTTCCTGTTTCAGCTTTTGAGATTGAAGAGAAAAAAAGTGATGATGATAATAAGAAGCAAGTTAATGAAGGTAATGAATATGTGGGAGTGAAAGAAGTTTGA 495 0.3354 MSIVIDDIKSRAEIYHGDELCQLKSKELLKEIALPNGLLPLKDIEECGYDRESGYVWLKQKKSYTHKFEKIGKLVSYGSEVSAYVENGKIKKLCGVKTKELLLWITLSDIYVDDPPNGKITFKTPSGLYRSFPVSAFEIEEKKSDDDNKKQVNEGNEYVGVKEV 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0177 164 PANTHER PLANT/F25P12-18 PROTEIN 2 156 - -
Lal5g0177 164 PANTHER T31J12.3 PROTEIN-RELATED 2 156 IPR007493 -
Lal5g0177 164 MobiDBLite consensus disorder prediction 143 164 - -
Lal5g0177 164 Gene3D - 7 148 IPR036758 -
Lal5g0177 164 SUPERFAMILY At5g01610-like 7 143 IPR036758 -
Lal5g0177 164 Pfam Protein of unknown function, DUF538 26 138 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0177 Lal-Chr5 1542517 1543011 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0177 - - vra:106757663 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0177 5 1542517 1543011 Lal5g0177 5 1542517 1543011 ECH
Lal3g1430 3 20227152 20227610 Lal5g0177 5 1542517 1543011 LSH
Lal5g0177 5 1542517 1543011 Lal12g0571 12 4079888 4080382 PCT
Lal5g0177 5 1542517 1543011 Lal13g0605 13 3933679 3934176 PCT
Lal5g0177 5 1542517 1543011 Lal24g0477 24 3357006 3357506 PCT
Lal12g0571 12 4079888 4080382 Lal5g0177 5 1542517 1543011 PCT
Lal13g0605 13 3933679 3934176 Lal5g0177 5 1542517 1543011 PCT
Lal24g0477 24 3357006 3357506 Lal5g0177 5 1542517 1543011 PCT