Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1430 ATGTCAACATTGACACAGGAAATAAAATCTAGGGCAGAGATATACCATGGAGATGAGGTATGTCAAGTGAAATCTAAGGAACTTCTTAAGGAAATAGCCCTACCCAATGGGCTATTACCCTTAAAAGATATAGAGGAATGTGGTTATGATAGGGAAAGTGGGCATGTGTGGCTGAAACAAAAGAAAAGCTATACACACAAGTTTGAGAAGATTGGAAAGTTAGTGTCCTATGGAACTGAGGTCACCGCCCTTGTTGAGAAGGGTAGGATAAAAAAGCTGTCTGGTGTTAAGACAAAAGAGCTTTTGCTTTGGATTTCTTTGAATGAGATTTTTGTTGAAGATCCACCAAATGGTAATATCACTTTCAAAACACCTACAGGGTTATATAGGACATTTCCAGTTTCTGCTTTTGAGATTGAAGACAAAAGTGATAAATCTGTGGGAGTTAAGGAGGTTTGA 459 0.3813 MSTLTQEIKSRAEIYHGDEVCQVKSKELLKEIALPNGLLPLKDIEECGYDRESGHVWLKQKKSYTHKFEKIGKLVSYGTEVTALVEKGRIKKLSGVKTKELLLWISLNEIFVEDPPNGNITFKTPTGLYRTFPVSAFEIEDKSDKSVGVKEV 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1430 152 PANTHER T31J12.3 PROTEIN-RELATED 2 148 IPR007493 -
Lal3g1430 152 Pfam Protein of unknown function, DUF538 26 138 IPR007493 -
Lal3g1430 152 Gene3D - 6 149 IPR036758 -
Lal3g1430 152 PANTHER PLANT/F25P12-18 PROTEIN 2 148 - -
Lal3g1430 152 SUPERFAMILY At5g01610-like 6 142 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1430 Lal-Chr3 20227152 20227610 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1430 - - vra:106757663 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1430 3 20227152 20227610 Lal3g1430 3 20227152 20227610 ECH
Lal3g1430 3 20227152 20227610 Lal5g0177 5 1542517 1543011 LSH
Lal3g1430 3 20227152 20227610 Lal12g0571 12 4079888 4080382 PCT
Lal3g1430 3 20227152 20227610 Lal13g0605 13 3933679 3934176 PCT
Lal3g1430 3 20227152 20227610 Lal24g0477 24 3357006 3357506 PCT
Lal12g0571 12 4079888 4080382 Lal3g1430 3 20227152 20227610 PCT
Lal13g0605 13 3933679 3934176 Lal3g1430 3 20227152 20227610 PCT
Lal24g0477 24 3357006 3357506 Lal3g1430 3 20227152 20227610 PCT