Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0477 ATGTCTCTAGTGATCCCAGATGAGGTAAGAGCTAAAGCAGAGATATACCATGGAGATGAACTAGGCCAAGTAAAGTCCAAAGAACTTCTGATAGAAGTAGGGCTACCCAATGGACTTTTGCCATTGAAAGATATTGAAGAATGTGGGTATGATAGAGAGAGTGGATTTGTGTGGCTTATTCAGAAGAAAAGCTCAACTCACAAGTTTCAAAAGATTGATAGGCTTGCTACATATGCACCTCATGTTACAGCAAATGTTGAGTTTGGTAAGATCAAGAAACTCACTGGTGTGAAGGTCAGGGAAATGTTGGTTTGGCTCACACTCAATGAAATCTTTCTGAATGAGAAAAACAGTGATAAGATCACATTTAAGTCCTTTGCAGGGGTTTCTAGGACATTCCCTGTGTCAGCTTTTGAGATTGATGAGAACTATGTGGCTGAGGGTGTGGAGGAGGAAATTGTGGAAGTGGTAGATGCAACTGAAGCTGTTGAAGTGAAATGA 501 0.4072 MSLVIPDEVRAKAEIYHGDELGQVKSKELLIEVGLPNGLLPLKDIEECGYDRESGFVWLIQKKSSTHKFQKIDRLATYAPHVTANVEFGKIKKLTGVKVREMLVWLTLNEIFLNEKNSDKITFKSFAGVSRTFPVSAFEIDENYVAEGVEEEIVEVVDATEAVEVK 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0477 166 PANTHER T31J12.3 PROTEIN-RELATED 4 160 IPR007493 -
Lal24g0477 166 Gene3D - 8 149 IPR036758 -
Lal24g0477 166 SUPERFAMILY At5g01610-like 5 143 IPR036758 -
Lal24g0477 166 Pfam Protein of unknown function, DUF538 27 139 IPR007493 -
Lal24g0477 166 PANTHER PLANT/F25P12-18 PROTEIN 4 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0477 Lal-Chr24 3357006 3357506 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0477 - - gmx:100500427 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0477 24 3357006 3357506 Lal24g0477 24 3357006 3357506 ECH
Lal12g0571 12 4079888 4080382 Lal24g0477 24 3357006 3357506 LSH
Lal13g0605 13 3933679 3934176 Lal24g0477 24 3357006 3357506 LSH
Lal3g1430 3 20227152 20227610 Lal24g0477 24 3357006 3357506 PCT
Lal5g0177 5 1542517 1543011 Lal24g0477 24 3357006 3357506 PCT
Lal24g0477 24 3357006 3357506 Lal3g1430 3 20227152 20227610 PCT
Lal24g0477 24 3357006 3357506 Lal5g0177 5 1542517 1543011 PCT