Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0571 ATGGCTCTAGTCTCAGAAGAAATCAAAGCAAGATCAGAAATGTACCATGGAGATGAAATGGGTCAAATAAAATCCAAAGAACTTCTCAAAGAAGTAGGGTTACCCAATGGTCTTTTACCATTGAAAGATATTGAAGAATGTGGGTATGATAGGGAGAGTGGTTTTGTGTGGCTGATTCAGAAGAAAAGTTCAACTCACAAGTTCCATAAAGTTGGGAAGCTTGTGTCTTATGCACCTGAAGTCACTGCTACTGTTGAGTTTGGTAAGATCAAGAAACTCACTGGTGTGAAGGTAAAAGAGCTTTTGGTTTGGCTTACACTTAATGAAATATGTTTGAATGATCCACCTAATGGAAATATCACATTCAAAGCTACTTCAGGGCTTTTCAGAACTTTCCCAGTTTCAGCTTTTGAGGTTGAAGAGAAAGAAGTTGTGAAGGGAAATTTGGAAGTGAAAGAAGCTGAAGCTGAAGCTGTTGAAGTTAAAGAAGTTTGA 495 0.3798 MALVSEEIKARSEMYHGDEMGQIKSKELLKEVGLPNGLLPLKDIEECGYDRESGFVWLIQKKSSTHKFHKVGKLVSYAPEVTATVEFGKIKKLTGVKVKELLVWLTLNEICLNDPPNGNITFKATSGLFRTFPVSAFEVEEKEVVKGNLEVKEAEAEAVEVKEV 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0571 164 Pfam Protein of unknown function, DUF538 26 138 IPR007493 -
Lal12g0571 164 PANTHER T31J12.3 PROTEIN-RELATED 2 157 IPR007493 -
Lal12g0571 164 Gene3D - 6 149 IPR036758 -
Lal12g0571 164 PANTHER PLANT/F25P12-18 PROTEIN 2 157 - -
Lal12g0571 164 SUPERFAMILY At5g01610-like 4 143 IPR036758 -
Lal12g0571 164 Coils Coil 137 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0571 Lal-Chr12 4079888 4080382 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0571 - - vra:106757663 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0571 12 4079888 4080382 Lal12g0571 12 4079888 4080382 ECH
Lal12g0571 12 4079888 4080382 Lal13g0605 13 3933679 3934176 LSH
Lal12g0571 12 4079888 4080382 Lal24g0477 24 3357006 3357506 LSH
Lal3g1430 3 20227152 20227610 Lal12g0571 12 4079888 4080382 PCT
Lal5g0177 5 1542517 1543011 Lal12g0571 12 4079888 4080382 PCT
Lal12g0571 12 4079888 4080382 Lal3g1430 3 20227152 20227610 PCT
Lal12g0571 12 4079888 4080382 Lal5g0177 5 1542517 1543011 PCT