Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0605 ATGTCCTTGGTAATCCCAAATGAGGTCAAAGCCAGAGCAGAGATATACCATGGAGATGAACTCGGTCAAGTAAAGTCCAAGGAACTTCTTGCTGAAGTAGGGCTACCCAATGGACTTTTGCCATTGAAGGACATTGAAGAATGTGGTTATGATAGAGAGAGTGGTTTTGTGTGGCTGATTCAGAAGAAAAGCTCAACTCACAAGTTTCAGAAGATTGATAGGTTGGCCACCTATGCACCTCATGTAACTGCCACTGTTGAGTTTGGTAAGATCAAGAAGCTCACTGGTGTGAAGGTCAAGGAGCTTTTGGTTTGGCTCACACTCAATGAAATATTTCTGGATGAAGCAAACACTGACCAGATCACATTCAAGTCCTTTGCTGGGATTTCCAGGACATTCCCAGTGTCAGCTTTTGTGATTGATCCGGACTATGTAGCTGAGGGTGTGGATGAAAATGTGGAAGTGGAAGATGCAGCTGAACCTGTTGAAGTCAAATAA 498 0.4357 MSLVIPNEVKARAEIYHGDELGQVKSKELLAEVGLPNGLLPLKDIEECGYDRESGFVWLIQKKSSTHKFQKIDRLATYAPHVTATVEFGKIKKLTGVKVKELLVWLTLNEIFLDEANTDQITFKSFAGISRTFPVSAFVIDPDYVAEGVDENVEVEDAAEPVEVK 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0605 165 PANTHER T31J12.3 PROTEIN-RELATED 5 159 IPR007493 -
Lal13g0605 165 SUPERFAMILY At5g01610-like 5 144 IPR036758 -
Lal13g0605 165 PANTHER PLANT/F25P12-18 PROTEIN 5 159 - -
Lal13g0605 165 Gene3D - 8 150 IPR036758 -
Lal13g0605 165 Pfam Protein of unknown function, DUF538 27 138 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0605 Lal-Chr13 3933679 3934176 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0605 - - gmx:100500427 202.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0571 12 4079888 4080382 Lal13g0605 13 3933679 3934176 LSH
Lal13g0605 13 3933679 3934176 Lal24g0477 24 3357006 3357506 LSH
Lal3g1430 3 20227152 20227610 Lal13g0605 13 3933679 3934176 PCT
Lal5g0177 5 1542517 1543011 Lal13g0605 13 3933679 3934176 PCT
Lal13g0605 13 3933679 3934176 Lal3g1430 3 20227152 20227610 PCT
Lal13g0605 13 3933679 3934176 Lal5g0177 5 1542517 1543011 PCT