Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0217 ATGGATCTGAGTAACCTTTCACCTGCTGATGGGCTTGAAGCAATCCACCAAAATGGTGTTCATGAAGAATCGTCAAATTCTGGAAATGGTGTTGTTTCAAATAATGTAGACCCCAATGTTACTGAAATTGTAGAGACTGTGGCTCTAAATGGAATTCTTGAAATTTTTGACAAGTCGGATAGTAATGTAACCGATAACTCGTCAATGGGAGCAACCAAAGAAGGATCAAATGATACCGTGGATGGAAACAATGCCACCATTTCTATGGAAGAGGAAGTCAAAATCATAGATAAAACAGTAAAATCGAGAGCACAAAAGGGTCCTATCAAGAACAAGATTGTAAAGCCTCCAAGTGCCAGGGTTATTCATTCAAGTTTGGTAAAGAAGAGCAAAGATGGAAAAGGTGGAGAGGCACCACCTGCTGTTTCAAATCGTACTCTGGCTTTAGACTCTAACCCAAGACAGCCTATTAAAAACAAATCATTCAATGACAAGCAGACTCAAAACAAGCACCCTGGAAAACCTGATGCAGCATCTTCTAAAGCACCCAAACAGAAGACCGAACCAAGATCATTGAAGAAAGGGCCGCTGCCTGATAATGTTCAAGGAGAATCAGAATCTTCTTCTCCTACTGAACAAGATGCCAAACCTCGCAAGGTGGGGGCACTTCCAAATTATGGATTCAGTTTCAAGTGTGACGAGCGAGCTGAGAGAAGAAAAAAGTTCTATACAGAGCTTGAGGAGAAGATTCATGCAAAGGAAGTGGAGGAGAGTAACCTGCAAGCAAAAACCAAGGAGTCACAAGAAGCCGAGATTAAAAGGCTTAGGCAGAATCTAGCATTTAAAGCAACTCCAATGCCGACTTTCTACCAGGAGCCTCCTCCTAGGGTGGAGTTAAAGAAGATACCAACTACAAGAGCAAAATCTCCCAAGCTTGGTCGTAGGAAGAGTTCAACATCTGCAGAGTCAGAAGGAAACACTAGCAGCAGTGCTCGACTAGGTCATTTAAGCCTGGATGAGAAAGTGTCTCAGAGTAAACCTGCTAAGGCAGTTACTCCTGTCCATCAAAGAAAGCCACAGCGAAAATCTCTTCCTCCACGACTTAATTCTGAAAGGATCAGTTCATCTGATTCAGCAACTGCACCAACTTCATCTAAGGCAGTGGATGATGAAAATGCATCCTTATCTAAAGCTACCCTCTTGTCCAATGCAACAGAGGACGAGAAAGTTGAGATGGCTGCAGGCAATGAAGAGAACAATGCTCTGTCCAATGAGACAACCTCAGACAAGCCAAGTGAAGCAGAATCTTATGTGAATAGTGATATAGTCATTGAAGAGAAACCAGATATCGTGTTGGTACCAGAACCTATAGCGGCAGAACATTAA 1386 0.4257 MDLSNLSPADGLEAIHQNGVHEESSNSGNGVVSNNVDPNVTEIVETVALNGILEIFDKSDSNVTDNSSMGATKEGSNDTVDGNNATISMEEEVKIIDKTVKSRAQKGPIKNKIVKPPSARVIHSSLVKKSKDGKGGEAPPAVSNRTLALDSNPRQPIKNKSFNDKQTQNKHPGKPDAASSKAPKQKTEPRSLKKGPLPDNVQGESESSSPTEQDAKPRKVGALPNYGFSFKCDERAERRKKFYTELEEKIHAKEVEESNLQAKTKESQEAEIKRLRQNLAFKATPMPTFYQEPPPRVELKKIPTTRAKSPKLGRRKSSTSAESEGNTSSSARLGHLSLDEKVSQSKPAKAVTPVHQRKPQRKSLPPRLNSERISSSDSATAPTSSKAVDDENASLSKATLLSNATEDEKVEMAAGNEENNALSNETTSDKPSEAESYVNSDIVIEEKPDIVLVPEPIAAEH 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0217 461 MobiDBLite consensus disorder prediction 102 231 - -
Lal4g0217 461 MobiDBLite consensus disorder prediction 314 334 - -
Lal4g0217 461 MobiDBLite consensus disorder prediction 417 435 - -
Lal4g0217 461 MobiDBLite consensus disorder prediction 284 441 - -
Lal4g0217 461 MobiDBLite consensus disorder prediction 145 163 - -
Lal4g0217 461 MobiDBLite consensus disorder prediction 367 403 - -
Lal4g0217 461 Pfam Targeting protein for Xklp2 (TPX2) domain 228 298 IPR027329 -
Lal4g0217 461 PANTHER PROTEIN WVD2-LIKE 5-RELATED 1 450 - -
Lal4g0217 461 Coils Coil 243 273 - -
Lal4g0217 461 MobiDBLite consensus disorder prediction 60 85 - -
Lal4g0217 461 PANTHER PROTEIN WVD2-LIKE 4 1 450 IPR044833 GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0217 Lal-Chr4 1366414 1370885 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0217 - - gmx:100804879 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0217 4 1366414 1370885 Lal4g0217 4 1366414 1370885 ECH
Lal17g0230 17 1430757 1435338 Lal4g0217 4 1366414 1370885 LSH
Lal21g0335 21 2237214 2241433 Lal4g0217 4 1366414 1370885 LSH
Lal25g1056 25 13900450 13904617 Lal4g0217 4 1366414 1370885 PCT
Lal10g0024 10 246230 254129 Lal4g0217 4 1366414 1370885 PCT
Lal4g0217 4 1366414 1370885 Lal25g1056 25 13900450 13904617 PCT
Lal4g0217 4 1366414 1370885 Lal10g0024 10 246230 254129 PCT