Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1056 ATGCGGCCAGTCACAGTTGCGGTCTTTAAACCGCAGTATTGTGATCGCAATGTAAAACAGTTTTTGCAGTCTCTGCAACTTAGTTGTGGCGATCACAACTACAATGAGTTGAGCCTTGGTGGAACTGAGTTCAAATCTCGGAAACAACATTACTCGTTGTGGGATAAGGCTGTTTCACTTTTGGGTCTTTTCTGGCATTTCAGTCTTATCTTTCTTCTTCAAGGAGCTCTTGGCTTAGTGTGGATGATGGATCCAAGTAACCTTTCATTTGGTGACGGGATCGAAGTGGTTCACCAAAATGATGCTCATCATGAGCCTTCAAATTCTGAAGAGGATAGCGCTGTTTCAAATGATCTAAACACCAATCTTACTGAAAGTACAGAATCCGAACCCCAAAATGGAAATTTCAAAAATTTCAACCAGTCTGATAGCGTTGTAACTGAGAACTCATCTGTGGCCGCAGAAATCAAGGTATCAAATGAAAGCACCAATGGCAACAATGTGACCCTTTCTAAGGAAGAGGAAGTGAAAATCACAAATCAAACAGGACAATTAAAAGCACTAAAGGATCCTCTTAAGACTAAGAATTCTAAGGCCTCAACTTCCAGCGGTGTCCATGCAAGTTTGGTTAAAAGGAACAAAATTGCAAAAGATAAACCGGCAGCATCTTCTGTTTCAAATGGTACATGGGCTTTAAACTCTTCCACTAGACAGCCTATTAAAAGCAGATCATTGAATAACCGGAAAACTCGATTGTCCATGCACCCTTCAAAGTCTGATGCATCATCTTCTGATGTAGCTACGGAGAAGACAAAACCAAAATCATTGAAAAAAGGACCTGTAGATAAAGGTAAACGAGAAGCAGAATCTTCTTCAAGTACTAATGCGGAAGATGCAAAACCTCGCAAGTTGGGGACACTTCCAAATTATGGGTTCAGTTTAAGGTGTGGTGAAAGAGCTGAGAAAAGAAGAGAGTTCTACATTAAAATTGAGGAAAAGATTCATGCAAAGGAGGTGGAAACTGGTAACTTGCAAGCAAAATCCAAGGAGTCACAAGAAACTGAGATTAAGATGCTTAGGAAGAGTCTAACATTCAAAGCAACTCCTTTGCCAACTTTCTACCAGGAGCCTCCTCCTCCTAAGGTGGAGCTTAAGAAGATACCAACTACAAGACCCAAATCTCCCAAGCTTGGTCGTAAGAAGAGTTCAATCAATTCTGAGTCAGATGGAAACACTAGCAGCAGTTCTCAACAAGGTCGTATAAGTTTCGATGAGAAAACTAACCAGAGTAATAACCCTACTAAAGGAGTTACTCCTATTCATCCAAAGAAGCCACTACGGAAATCTCTTCATGCTCGACTTGCTGCTACGAAGCTCAATTCACCCAATTCAAAAACTGCACCGCACGCTTCATTTGAAGCAAGGAAGGTTGAAAAGACTGTGTCTAGCGCGACAAAGAAAGATACCACTTCATCCAATGCCACAGAGGAAGATAAAATTGCAATACCTGCGACCAATGAAGAGGAGAATACATTGTCCAGCGACACGAGTGAGGCTCTGCTCCTGAATGTAGTTCATTCAGACAAACCGAGTGAAACGGAGTCTCATTTGAATGGTGATCCAGTGGTTGAAGATAATCCTCAGCTTCCCTTTGCTCAAGAACCCATCAAGGCAGAACATTAA 1683 0.4159 MRPVTVAVFKPQYCDRNVKQFLQSLQLSCGDHNYNELSLGGTEFKSRKQHYSLWDKAVSLLGLFWHFSLIFLLQGALGLVWMMDPSNLSFGDGIEVVHQNDAHHEPSNSEEDSAVSNDLNTNLTESTESEPQNGNFKNFNQSDSVVTENSSVAAEIKVSNESTNGNNVTLSKEEEVKITNQTGQLKALKDPLKTKNSKASTSSGVHASLVKRNKIAKDKPAASSVSNGTWALNSSTRQPIKSRSLNNRKTRLSMHPSKSDASSSDVATEKTKPKSLKKGPVDKGKREAESSSSTNAEDAKPRKLGTLPNYGFSLRCGERAEKRREFYIKIEEKIHAKEVETGNLQAKSKESQETEIKMLRKSLTFKATPLPTFYQEPPPPKVELKKIPTTRPKSPKLGRKKSSINSESDGNTSSSSQQGRISFDEKTNQSNNPTKGVTPIHPKKPLRKSLHARLAATKLNSPNSKTAPHASFEARKVEKTVSSATKKDTTSSNATEEDKIAIPATNEEENTLSSDTSEALLLNVVHSDKPSETESHLNGDPVVEDNPQLPFAQEPIKAEH 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1056 560 MobiDBLite consensus disorder prediction 265 293 - -
Lal25g1056 560 MobiDBLite consensus disorder prediction 370 445 - -
Lal25g1056 560 MobiDBLite consensus disorder prediction 484 499 - -
Lal25g1056 560 MobiDBLite consensus disorder prediction 194 208 - -
Lal25g1056 560 MobiDBLite consensus disorder prediction 187 312 - -
Lal25g1056 560 MobiDBLite consensus disorder prediction 156 175 - -
Lal25g1056 560 MobiDBLite consensus disorder prediction 220 264 - -
Lal25g1056 560 Pfam Targeting protein for Xklp2 (TPX2) domain 312 382 IPR027329 -
Lal25g1056 560 PANTHER PROTEIN WVD2-LIKE 4 83 550 IPR044833 GO:0008017
Lal25g1056 560 PANTHER PROTEIN WVD2-LIKE 5-RELATED 83 550 - -
Lal25g1056 560 MobiDBLite consensus disorder prediction 527 560 - -
Lal25g1056 560 MobiDBLite consensus disorder prediction 458 515 - -
Lal25g1056 560 MobiDBLite consensus disorder prediction 399 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1056 Lal-Chr25 13900450 13904617 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1056 - - gmx:100786958 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g1056 25 13900450 13904617 Lal25g1056 25 13900450 13904617 ECH
Lal25g1056 25 13900450 13904617 Lal10g0024 10 246230 254129 LSH
Lal25g1056 25 13900450 13904617 Lal17g0230 17 1430757 1435338 PCT
Lal25g1056 25 13900450 13904617 Lal21g0335 21 2237214 2241433 PCT
Lal25g1056 25 13900450 13904617 Lal4g0217 4 1366414 1370885 PCT
Lal17g0230 17 1430757 1435338 Lal25g1056 25 13900450 13904617 PCT
Lal21g0335 21 2237214 2241433 Lal25g1056 25 13900450 13904617 PCT
Lal4g0217 4 1366414 1370885 Lal25g1056 25 13900450 13904617 PCT