Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0230 ATGATGGATCCAAGTATCCTTTTGCCTGCGGACGGGCTTGAAGCAATCCACCAAAATGGTGTTCACGATGAATCATCTAATTCTGGAAATGATGTTGTTTCAAATAGTGTAGATCCCATTGTTAATGAAATTGCAGAAACTGTAGCTCTAAATGGAAATCTTGAAAATTTCGAGCAGTCAGGTAGCACCGTAAGCAACAACTCATCTACGGCAGCAATCAAAGAAGGACCAATTCACACTGTGGATAGCCACAATGCCGCCGTTTCTAAGGAAGAGGAAGTTAAAATCATGGACCAAACAATGCAATCAAGAGCACAGAAGGGTCATGTCAATAATAAGACTGTCAAGCCCCCCAGTCCCAGGGGTACTTCTTCAAGTTTGGTAAAGAGCAAAGACGGAAAAGGTGAAGAGGCACCACCTGCTGTTCCAAATGGTACTTCGGCTTTAGGCTCTAACCCGAGACAGCCTATTAAAAATAGATCATTCAGTGACAAGCAGACTCAACAAAAGCAGCCTGGAAAACTTGATGCAGCATCTTCCAAAGCACTGATGGAGAAGACTAAACCAAGTTCACTGAAGAAAGGGCTGCCTGATAATGTTAAAGGAAAAGAAGATTCTTCTTCTCCTGCTGCACAAGATGCCAAAACTCGCACAGTTGGGGTACGTCCAAACTATGGATTCAGGTTCAAGTGTGATGAGCGAGCTGAGAGAAGAAAACAGTTTTACACACAGCTTGAGGAAAAGATTCATGCAAAGGAAGTGGAGGAGAGTACCATGCAAGCTAAAACTAAGGAGACCCAAGAAGCCGAGATTAAAATGCTTAGGAAAACTCTAGCATTTAAAGCTACTCCAATGCCAAGCTTCTACCAGGAGCCTCCTCCTCCTAGGGTGGAATTAAAGAAGATACCAACTACAAGAGCAAAATCTCCCAAGCTTGGTCGTAGGAAGAGTTCAACATATTCAGAGCCAGATGTGAACACTAGCAGCAGCGTTCGACTAGGTCGTTTAAGTCTGGACGAGAAAGTATCTCAGAGTAAACCCACTAAGGGAGTTATTCCTGCCCATCAAAAGAAGCCACAGCGAAAATCTCTTCCTCCTAGACTTACTTCTGAAAAGATCAGTTCATCCAATTCAGCAACCTCACCGACTTCATCTGAGGCAGTGGGTGATGAAAAGACCTCCTTATCTGAATTTACCCCCTTGTCCCATGCAACAGAGGAAGAGAAAGTTGAGATAGCTGCAGCCGTTGAAGAGAACAATACTTTGTCCAATGAGACAACCTCCGACAAGCCAAGTGAAGCAGAATCTCATGTGAATGGTGATATAGTCACTGAAGAGAAACCAGATATCACCTCGGTACCAGAACCCATACCAGCATAA 1380 0.4384 MMDPSILLPADGLEAIHQNGVHDESSNSGNDVVSNSVDPIVNEIAETVALNGNLENFEQSGSTVSNNSSTAAIKEGPIHTVDSHNAAVSKEEEVKIMDQTMQSRAQKGHVNNKTVKPPSPRGTSSSLVKSKDGKGEEAPPAVPNGTSALGSNPRQPIKNRSFSDKQTQQKQPGKLDAASSKALMEKTKPSSLKKGLPDNVKGKEDSSSPAAQDAKTRTVGVRPNYGFRFKCDERAERRKQFYTQLEEKIHAKEVEESTMQAKTKETQEAEIKMLRKTLAFKATPMPSFYQEPPPPRVELKKIPTTRAKSPKLGRRKSSTYSEPDVNTSSSVRLGRLSLDEKVSQSKPTKGVIPAHQKKPQRKSLPPRLTSEKISSSNSATSPTSSEAVGDEKTSLSEFTPLSHATEEEKVEIAAAVEENNTLSNETTSDKPSEAESHVNGDIVTEEKPDITSVPEPIPA 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0230 459 MobiDBLite consensus disorder prediction 102 129 - -
Lal17g0230 459 MobiDBLite consensus disorder prediction 367 401 - -
Lal17g0230 459 PANTHER PROTEIN WVD2-LIKE 5-RELATED 2 450 - -
Lal17g0230 459 MobiDBLite consensus disorder prediction 60 86 - -
Lal17g0230 459 MobiDBLite consensus disorder prediction 102 223 - -
Lal17g0230 459 MobiDBLite consensus disorder prediction 281 459 - -
Lal17g0230 459 MobiDBLite consensus disorder prediction 187 201 - -
Lal17g0230 459 MobiDBLite consensus disorder prediction 430 444 - -
Lal17g0230 459 MobiDBLite consensus disorder prediction 60 74 - -
Lal17g0230 459 MobiDBLite consensus disorder prediction 314 334 - -
Lal17g0230 459 Coils Coil 405 425 - -
Lal17g0230 459 MobiDBLite consensus disorder prediction 145 175 - -
Lal17g0230 459 PANTHER PROTEIN WVD2-LIKE 4 2 450 IPR044833 GO:0008017
Lal17g0230 459 Pfam Targeting protein for Xklp2 (TPX2) domain 227 298 IPR027329 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0230 Lal-Chr17 1430757 1435338 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0230 - - gsj:114408962 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0230 17 1430757 1435338 Lal17g0230 17 1430757 1435338 ECH
Lal17g0230 17 1430757 1435338 Lal21g0335 21 2237214 2241433 LSH
Lal17g0230 17 1430757 1435338 Lal4g0217 4 1366414 1370885 LSH
Lal25g1056 25 13900450 13904617 Lal17g0230 17 1430757 1435338 PCT
Lal10g0024 10 246230 254129 Lal17g0230 17 1430757 1435338 PCT
Lal17g0230 17 1430757 1435338 Lal25g1056 25 13900450 13904617 PCT
Lal17g0230 17 1430757 1435338 Lal10g0024 10 246230 254129 PCT