Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0335 ATGATGGATCCAAGTAACCTTTTACTTGCTGATGGGCTTGAAGCAATCCACCAAAATGGCGTTCTTGAAGAATCATCTAATTCTGGAAATGGTGTTGTTTCAAACAATGTAGACTACATTGTTACTGAAATTGCAGAAACTGTAGCTCTAAATGGAAATCTTGAAAATTTTAATCAGTCGGATAGCACTGTAACTAATAACTCGTCTACTGCAGCAACAGAAGAAGGATCCAATGATACCATGGATGGCAGCAATGCCACCATTTCTAAGGCGAGAGAAGAGGAAGTTAAAATCATAGATCAAACAGTGCAATCAAGAGCACAAAAGGGTCCTGTCAAGAACAAGACTGTAAAGCCCCCAAGTCCTAGAGGTATTCGTTCAAGTTTGGTAAAGACGAACAAATATGGAAAAGGTGAAGAGGCACCACCTGCTGTTTCAAATGGTACTTTGGGGTTACACTCTAACCCAAAACAGCCTATTAAAAACAGATCATTGAATGACAAGCAGACTCAACCCAAGCACCTTGGAAAACCTGATGCGGCATCTTCTGAAGCACCCATAGAGAAGAACAAACTAAGATCATTGAAGAAAGGGCCGCCAGATACTGTTCAAGGAGAAACGGATTCTTCTTCCCCAACTGCAAAAGATGCCAAACCTCGCAAGGCAGGGGCACTTCCAAACTATGGATTCAGTTTCAAGTGTGATGAGCGAGCTGAGAGAAGAAAACAGTTCTACACACAGCTTGAGGAAAAGATTCATGCAAAGGAAGCGGAGGAGAGTACCCTGCAAGCGAAAAGCAAGGAGACCCAAGATGCCGAGATTAAAATGCTTAGGAAGACTCTAGCATTTAAAGCTACTCCAATGCCAAGCTTCTACCAGGAGCCTCCTCCCCCTAGGGTGGAGTTAAAGAAGATACCAACTACAAGAGCAAAATCTCCTAAGCTTGGTCGGGGGAAGAATTCAACATATTCAGAGTCAAAAGGAATCACTAGCAACAGCATTCCACTAGGTCGTTTAAGTCTGGATGAGAAAATGTCTCAGAGTAAACCTATTAAGGGAGTTATTCCTGTCCATCAAAAGAAGCCACAGCGAAAATCTCTTCCTCCTAGACTTACTTCTGAAAAGATCATTTCATCCAATTCAGCAACCCTACCAACTTTATCTAAGGCGGTGGCTGATGAAATGACCTCCTTATCTAAAGTTACCCCCTTCTCTAATGCAACCGGAAAAGAGAAAGTTGAGATGGCTGCAGCCACTGAAGAGAACAATACTTTGTCCAACGGGACAACCTCAGACAAGCCAAGTGAAGCAGAATCTTATGTGAACGGTGATATAGTCATTGAAGAGAAACCAGAGATCACCTTGCTACCAGAACCCATATCAGCAGAACATTAA 1395 0.4258 MMDPSNLLLADGLEAIHQNGVLEESSNSGNGVVSNNVDYIVTEIAETVALNGNLENFNQSDSTVTNNSSTAATEEGSNDTMDGSNATISKAREEEVKIIDQTVQSRAQKGPVKNKTVKPPSPRGIRSSLVKTNKYGKGEEAPPAVSNGTLGLHSNPKQPIKNRSLNDKQTQPKHLGKPDAASSEAPIEKNKLRSLKKGPPDTVQGETDSSSPTAKDAKPRKAGALPNYGFSFKCDERAERRKQFYTQLEEKIHAKEAEESTLQAKSKETQDAEIKMLRKTLAFKATPMPSFYQEPPPPRVELKKIPTTRAKSPKLGRGKNSTYSESKGITSNSIPLGRLSLDEKMSQSKPIKGVIPVHQKKPQRKSLPPRLTSEKIISSNSATLPTLSKAVADEMTSLSKVTPFSNATGKEKVEMAAATEENNTLSNGTTSDKPSEAESYVNGDIVIEEKPEITLLPEPISAEH 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0335 464 Pfam Targeting protein for Xklp2 (TPX2) domain 230 301 IPR027329 -
Lal21g0335 464 MobiDBLite consensus disorder prediction 419 437 - -
Lal21g0335 464 MobiDBLite consensus disorder prediction 314 337 - -
Lal21g0335 464 PANTHER PROTEIN WVD2-LIKE 4 2 453 IPR044833 GO:0008017
Lal21g0335 464 Coils Coil 245 265 - -
Lal21g0335 464 MobiDBLite consensus disorder prediction 102 228 - -
Lal21g0335 464 PANTHER PROTEIN WVD2-LIKE 5-RELATED 2 453 - -
Lal21g0335 464 MobiDBLite consensus disorder prediction 57 85 - -
Lal21g0335 464 MobiDBLite consensus disorder prediction 403 447 - -
Lal21g0335 464 MobiDBLite consensus disorder prediction 287 380 - -
Lal21g0335 464 MobiDBLite consensus disorder prediction 148 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0335 Lal-Chr21 2237214 2241433 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0335 - - gmx:100804879 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0335 21 2237214 2241433 Lal21g0335 21 2237214 2241433 ECH
Lal17g0230 17 1430757 1435338 Lal21g0335 21 2237214 2241433 LSH
Lal21g0335 21 2237214 2241433 Lal4g0217 4 1366414 1370885 LSH
Lal25g1056 25 13900450 13904617 Lal21g0335 21 2237214 2241433 PCT
Lal10g0024 10 246230 254129 Lal21g0335 21 2237214 2241433 PCT
Lal21g0335 21 2237214 2241433 Lal25g1056 25 13900450 13904617 PCT
Lal21g0335 21 2237214 2241433 Lal10g0024 10 246230 254129 PCT