Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1367 ATGGTTGTCACTACTCCCTCTCTATCTCCTTCAGAAAAGAAACATTGGTGGCTCACCAACAGAAAGATTGTTGAGAAATACATAAAAGATGCTAGGACCCTGATTGCAAAACAAGAACAAAGTGAAATTGTTTCAGCTTTGAACCTTCTTGATGCAGCTCTAGCTATTTCGCCACGGTTGGATCAAGCTATTGAGCTTAGAGCAAAGTCTTTGCTTTATTTGAGAAGGTTTAAAGAGGTTGCTGATATGCTTCAGGATTATATTCCAAGTTTGAGAATGGCAAATGATTATTCAAGTTATGTTTCTTCTGATAGTTCCTCTCAGAAGCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTGAGTCACTAGAGAAAGATCAGATTTTCAAGTGTTTCTCTGTTTCTGACCTCAAGAACAAGGTCATGGCAGGGATTAGTAAAAGTTGCAACAAAGAAGGGCAATGGAGATACTTGGTTTTGGGTCAAGCATGCTGCCATCTAGGCCTAATGGAGGATGCAATGGTCCTTCTCCAAACAGGTAAACGTCTTGCGTCTGCCGCATTCCGCCGTGAGAGTGTGTGCTGGTCCGATGACAGCTTCTCTCTATCAACTATCCCTTTCGGTGCAGACACAACAAACCGGCCACCACCACCATCCACTCCACCGCGTGCACCTATCGCAGAATCCGAAAACATCACCAACCTCCTCGCCCAGATCAAATTCCTCCTCCGCCGTCGCACTGCTGCCCTCGCAGCACTTGATGCCGGCCTTTACTCAGAGGCCATCCGCCACTTCTCCAAAATCCTCGATGGCCGCCGCGGTGCCCCTCAGGGTTTCCTTGCCGAGTGCTACTTGCATAGAGCATCAGCCTACAGCTCTTCTGGTCGAATCGCAGAGTCTATAGCCGATTGTAACCGTACCTTAGCCCTCGACCCTACTTGCATTCAAGCCCTTGACACCAGAGCTTCCCTCTTCGAAACCATTCGATGCTTACCCGATTCTCTACATGATCTTGAACACTTGAAGCTCCTGTACAATGCAATCTTGCGCGATCGCAAGCTTCCCGGACCCGCATGGAAGCGTCACAATGTGCAATACAGGGAAATTCCCAGTAAACTTTGTGCCTTAACCACAAAGATTCAAGAATTGAAGTCCAGGTTGGCTTCGGGTGAGAGTGGAAATGTGGATTACTGTGCATTGATTGGAGTCAGAAGAGGGTGTTCACGATCCGAGTTAGAGAGGGCTCATGTGTTACTTACATTACGGCACAAGCCTGATAAAGCTACTAACTTTATCGACCGATGCGAGCTCGCGAACACGCGTGATCTCGAAACAGTAAAGGAAAGAGCAAAGATGTCAGCATTGTTGCTATATAGATTGGTTCAGAAAGGTTACACAAGTGTGATGAGTACTATAATGGACGAGGAAGCCGCCGAGAAACAAAGGAAGAAGGCATTACAAGCTGCTGCACAAGCAATTCAAGTTCAGAAAACAAACCAACATGAAATGAAGAATAATAAAGAAGATAAATTGGTGACTAATAGAAGCAGCAACAACAATGTTTCAGTGGAAAATAAAACTACTATAACTTCTACTACCGTAAATCCTGCGGCTTTCCAAGGTATTTTTTGCCGCGATCTCACGGTGGTTGGGAATTTGCTTTCACAGGTGGGGTTCAATAGACCAATTCCAATGAAGTATGAAGCATTGAGCTGCTAA 1719 0.4532 MVVTTPSLSPSEKKHWWLTNRKIVEKYIKDARTLIAKQEQSEIVSALNLLDAALAISPRLDQAIELRAKSLLYLRRFKEVADMLQDYIPSLRMANDYSSYVSSDSSSQKLLSSSSSSSSSESLEKDQIFKCFSVSDLKNKVMAGISKSCNKEGQWRYLVLGQACCHLGLMEDAMVLLQTGKRLASAAFRRESVCWSDDSFSLSTIPFGADTTNRPPPPSTPPRAPIAESENITNLLAQIKFLLRRRTAALAALDAGLYSEAIRHFSKILDGRRGAPQGFLAECYLHRASAYSSSGRIAESIADCNRTLALDPTCIQALDTRASLFETIRCLPDSLHDLEHLKLLYNAILRDRKLPGPAWKRHNVQYREIPSKLCALTTKIQELKSRLASGESGNVDYCALIGVRRGCSRSELERAHVLLTLRHKPDKATNFIDRCELANTRDLETVKERAKMSALLLYRLVQKGYTSVMSTIMDEEAAEKQRKKALQAAAQAIQVQKTNQHEMKNNKEDKLVTNRSSNNNVSVENKTTITSTTVNPAAFQGIFCRDLTVVGNLLSQVGFNRPIPMKYEALSC 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1367 572 SUPERFAMILY TPR-like 248 341 IPR011990 GO:0005515
Lal3g1367 572 SMART tpr_5 281 314 IPR019734 GO:0005515
Lal3g1367 572 Gene3D Tetratricopeptide repeat domain 8 340 IPR011990 GO:0005515
Lal3g1367 572 MobiDBLite consensus disorder prediction 206 226 - -
Lal3g1367 572 PANTHER - 4 572 - -
Lal3g1367 572 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 4 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1367 Lal-Chr3 19447269 19450145 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1367 - - gmx:100808420 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1367 3 19447269 19450145 Lal3g1367 3 19447269 19450145 ECH
Lal3g1367 3 19447269 19450145 Lal5g0239 5 2088549 2092343 LSH
Lal3g1367 3 19447269 19450145 Lal12g0522 12 3709260 3712985 PCT
Lal3g1367 3 19447269 19450145 Lal13g0524 13 3385115 3388622 PCT
Lal3g1367 3 19447269 19450145 Lal24g0420 24 2979276 2982089 PCT
Lal12g0522 12 3709260 3712985 Lal3g1367 3 19447269 19450145 PCT
Lal13g0524 13 3385115 3388622 Lal3g1367 3 19447269 19450145 PCT
Lal24g0420 24 2979276 2982089 Lal3g1367 3 19447269 19450145 PCT