Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0183 ATGGAGAAGGTGATGAGGTTGGCCTCAGAAAAGGGTGTAGTGATTTTCACCAAGAGCTCTTGTTGTCTCTGCTATGCTGTGAACATTCTGTTTAAGGAAATTGGAGTGGTTCCTGCAGTGTATGAAATTGACAAAGACCCTGAAGGTAGGGAAATGGAGAAAGCTATAAGAAGGTTGGGTTGCCATGCACCAGTCCCTGCAGTATTCATTGGAGGGAACCTTGTGGGATCCACCAATGAAGTTATGTCCCTCCATCTTAGTGGTTCACTCGTTCCATTGCTCCATCAATATCAATCTCTATCCTAA 306 0.4444 MEKVMRLASEKGVVIFTKSSCCLCYAVNILFKEIGVVPAVYEIDKDPEGREMEKAIRRLGCHAPVPAVFIGGNLVGSTNEVMSLHLSGSLVPLLHQYQSLS 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0183 101 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 100 - -
Lal24g0183 101 CDD GRX_GRXh_1_2_like 13 93 - -
Lal24g0183 101 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Lal24g0183 101 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 99 IPR011905 -
Lal24g0183 101 Gene3D Glutaredoxin 1 101 - -
Lal24g0183 101 Pfam Glutaredoxin 13 75 IPR002109 -
Lal24g0183 101 PANTHER GLUTAREDOXIN 1 100 IPR011905 -
Lal24g0183 101 SUPERFAMILY Thioredoxin-like 1 97 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0183 Lal-Chr24 1330110 1330415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0183 1 100 Miscellaneous Gene Families AT4G15670 50.000 2.68e-35 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0183 K03676 - mnt:21403373 169.088
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0183 24 1330110 1330415 Lal24g0183 24 1330110 1330415 ECH
Lal5g0297 5 2625480 2626767 Lal24g0183 24 1330110 1330415 PCT
Lal18g0438 18 3640998 3641297 Lal24g0183 24 1330110 1330415 PCT
Lal24g0183 24 1330110 1330415 Lal3g1330 3 19095634 19095885 PCT
Lal24g0183 24 1330110 1330415 Lal5g0296 5 2624362 2624670 PCT