Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0296 ATGGATAGAGTGAGAGATTTGGCATCAAAAAAAGCAGCAGTTATATTTACAAAGAGTTCATGTTGCATGTGTCATAGCATCAAACAACTATTCTATGAACTTGGAGCAAGTCCTGAAGTTCATGAGCTTGACAATGATTCATATGGAAAAGAAATGGAATGGGCTATAAGAAGTTTGGGATGTAACCCTTCAGTTCCAGCAGTGTTCGTAGGTGGAAGATTTGTAGGTTCATCAAAAGATGTGATTTCTCTTCATGTTGATGGATCTCTCAAACAAATGCTCAAGGATGCAAAGGCCATCTGGTTTTAA 309 0.3786 MDRVRDLASKKAAVIFTKSSCCMCHSIKQLFYELGASPEVHELDNDSYGKEMEWAIRSLGCNPSVPAVFVGGRFVGSSKDVISLHVDGSLKQMLKDAKAIWF 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0296 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Lal5g0296 102 Gene3D Glutaredoxin 1 100 - -
Lal5g0296 102 Pfam Glutaredoxin 14 75 IPR002109 -
Lal5g0296 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Lal5g0296 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Lal5g0296 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Lal5g0296 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 101 IPR011905 -
Lal5g0296 102 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Lal5g0296 102 CDD GRX_GRXh_1_2_like 12 93 - -
Lal5g0296 102 PANTHER GLUTAREDOXIN-C1 PROTEIN 1 101 - -
Lal5g0296 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0296 Lal-Chr5 2624362 2624670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0296 1 102 Miscellaneous Gene Families AT4G15700 50.980 1.13e-37 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0296 K03676 - gmx:100819447 199.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0296 5 2624362 2624670 Lal5g0296 5 2624362 2624670 ECH
Lal3g1330 3 19095634 19095885 Lal5g0296 5 2624362 2624670 LSH
Lal5g0296 5 2624362 2624670 Lal24g0185 24 1332934 1333581 PCT
Lal24g0183 24 1330110 1330415 Lal5g0296 5 2624362 2624670 PCT