Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0297 ATGACTTCCCTCTTCTCATATCCCGTTAATGATGGAACTCCCCGATGGTCAGAGGCTCCCTTGTCGAATTCTGTAAGTAACATCAGAATGGACAAGGTGATGAGGTTGGCTTCAGAAAAAGGTGTAGTGATTTTCACCAAAAGCTCTTGTTGTCTATGCTATGCAGTGAACATTTTGTTTAAAGAACTTGGGGTAAGGCCTATGGTTCATGAAATTGATCAAGACCCTGAAGGCAGAGAAATAGAGAAAGCTCTTTTAAGGTTAGGTTGTAGTGCACCTGTTCCAGCAGTATTCATTGGAGGGAAGTTAAGAGGGTCAACCAATGAAATCATGTCCCTACATCTTAGTGGATCATTGACTCATTTGCTGAAACCATACCAATCTTTATCTAGTTGA 396 0.4116 MTSLFSYPVNDGTPRWSEAPLSNSVSNIRMDKVMRLASEKGVVIFTKSSCCLCYAVNILFKELGVRPMVHEIDQDPEGREIEKALLRLGCSAPVPAVFIGGKLRGSTNEIMSLHLSGSLTHLLKPYQSLSS 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0297 131 ProSiteProfiles Glutaredoxin domain profile. 30 130 - -
Lal5g0297 131 CDD GRX_GRXh_1_2_like 42 119 - -
Lal5g0297 131 Gene3D Glutaredoxin 25 130 - -
Lal5g0297 131 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 30 129 - -
Lal5g0297 131 Pfam Glutaredoxin 42 103 IPR002109 -
Lal5g0297 131 PANTHER GLUTAREDOXIN 30 129 IPR011905 -
Lal5g0297 131 SUPERFAMILY Thioredoxin-like 30 126 IPR036249 -
Lal5g0297 131 TIGRFAM GlrX-like_plant: glutaredoxin-like family 33 129 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0297 Lal-Chr5 2625480 2626767 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0297 30 129 Miscellaneous Gene Families AT4G15660 50.000 4.36e-33 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0297 K03676 - gmx:100499748 183.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0297 5 2625480 2626767 Lal5g0297 5 2625480 2626767 ECH
Lal5g0297 5 2625480 2626767 Lal18g0438 18 3640998 3641297 LSH
Lal5g0297 5 2625480 2626767 Lal24g0183 24 1330110 1330415 PCT