Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1330 ATGTTGCATGTGCCACAGCATCAAACAACTTTTTATGAACTTGGTGCAAGCCCTGAAGTGCATGAACTTGATAATGATGAGTCCTATGGAAGGGAAATGGAATGGGCTTTAAGGAGTTTGGGATGTAACCCTTCAGTCCCTGTAGTGTTCATAGGTGGAAGATTTGTAGGGACATCAAAAGATGTTATTTCCCTTCATGTTGATGGCTCTCTAAAACAAATGCTCAAAGATGCTAAGGCCATTTGGTTTTAG 252 0.4087 MLHVPQHQTTFYELGASPEVHELDNDESYGREMEWALRSLGCNPSVPVVFIGGRFVGTSKDVISLHVDGSLKQMLKDAKAIWF 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1330 83 PANTHER GLUTAREDOXIN 10 82 IPR011905 -
Lal3g1330 83 SUPERFAMILY Thioredoxin-like 10 82 IPR036249 -
Lal3g1330 83 ProSiteProfiles Glutaredoxin domain profile. 1 82 - -
Lal3g1330 83 Pfam Glutaredoxin 11 56 IPR002109 -
Lal3g1330 83 Gene3D Glutaredoxin 6 82 - -
Lal3g1330 83 PANTHER GLUTAREDOXIN-C1 PROTEIN 10 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1330 Lal-Chr3 19095634 19095885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1330 8 83 Miscellaneous Gene Families AT4G15700 52.632 1.16e-23 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1330 K03676 - gmx:100819447 133.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1330 3 19095634 19095885 Lal3g1330 3 19095634 19095885 ECH
Lal3g1330 3 19095634 19095885 Lal5g0296 5 2624362 2624670 LSH
Lal3g1330 3 19095634 19095885 Lal24g0185 24 1332934 1333581 PCT
Lal24g0183 24 1330110 1330415 Lal3g1330 3 19095634 19095885 PCT