Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0438 ATGGACAAGGTTATGAGGTTAGCCTCAGAAAAGGGTGTGGTGATTTTCACCAAGAGCTCTTGTTGCCTCTGCTATGCTGTGAACATTCTTTTTCAAGAACTTGGGGTGAGGCCTATGGTTCATGAAATTGACCAAGACCCTGAAGGCAGGGAAATGGAGAAAGCTCTATTGAGGTTAGGCTGTACTTCACCGGTTCCGGCCGTATTCATCGGAGGGAAGCTAAGGGGGTCTACTAATGAAATCATGTCCCTTCACCTAAGTGGCTCATTGACTCAATTGCTGAAACCATATCAACCTTAA 300 0.4567 MDKVMRLASEKGVVIFTKSSCCLCYAVNILFQELGVRPMVHEIDQDPEGREMEKALLRLGCTSPVPAVFIGGKLRGSTNEIMSLHLSGSLTQLLKPYQP 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0438 99 CDD GRX_GRXh_1_2_like 13 93 - -
Lal18g0438 99 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 98 - -
Lal18g0438 99 ProSiteProfiles Glutaredoxin domain profile. 1 99 - -
Lal18g0438 99 Pfam Glutaredoxin 13 74 IPR002109 -
Lal18g0438 99 Gene3D Glutaredoxin 1 98 - -
Lal18g0438 99 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 97 IPR011905 -
Lal18g0438 99 SUPERFAMILY Thioredoxin-like 1 97 IPR036249 -
Lal18g0438 99 PANTHER GLUTAREDOXIN 1 98 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0438 Lal-Chr18 3640998 3641297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0438 1 95 Miscellaneous Gene Families AT4G15670 49.474 1.67e-32 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0438 K03676 - gmx:100499748 191.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0438 18 3640998 3641297 Lal18g0438 18 3640998 3641297 ECH
Lal5g0297 5 2625480 2626767 Lal18g0438 18 3640998 3641297 LSH
Lal18g0438 18 3640998 3641297 Lal24g0183 24 1330110 1330415 PCT