Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0722 ATGAACACTGGGGAACTTCTTAGCATCGAACCTCTTGAACTCAATTTCCCATTTGAGCTGAACAAACAGATCTCGTGTTCTCTTCAATTATCTAATAAGACCGATAGCTATGTAGCTTTCAAGGTGAAAACAACCAATCCCAAGAAGTATTGTGTTCGTCCAAACACCGGAATTGTCATGCCCCGATCTACATGTGATGTTATGGTTACCATGCAAGCGCAAAGAGAAGCTCCACCTGATATGCAATGCAAGGATAAGTTTCTTCTTCAGAGTGTAAAAACTAATGATGGTGTAAGCCCGAAGGATATCTCTGCAGATATGTTCAACAAGGAGGCAGGGCACGTGGTTGAAGAGTGCAAATTGAGAGTTGTGTATGTTTCACCACCACAACCACCATCTCCAGTCCTAGAAGGTTCAGAGGAGGGGTCATCGCCTAGAGGTTCGATTTCAGAAAATGGAACTCTCAATGGTTCTGACTTCACAGAAGTAGCAAGAGGATTTACTGAAAGACCTGAGGCTCTAGAAAAATCTTCAGAGGCAAGAGCTCACATCTCAAGGCTGACTGAAGAAAAGAATAATGCAATTCAGCAAAATAGCAAACTGCGTCAGGAACTGGACCTTCTAAAGCGTGAAGGCAGCAAAAATCGCAGCGGTGTCTCCTTTGTCTTCGTGATATTAATTGGATTACTTGGCATAATTATGGGGTATCTCATGAAGAAGACCTAA 726 0.427 MNTGELLSIEPLELNFPFELNKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVMPRSTCDVMVTMQAQREAPPDMQCKDKFLLQSVKTNDGVSPKDISADMFNKEAGHVVEECKLRVVYVSPPQPPSPVLEGSEEGSSPRGSISENGTLNGSDFTEVARGFTERPEALEKSSEARAHISRLTEEKNNAIQQNSKLRQELDLLKREGSKNRSGVSFVFVILIGLLGIIMGYLMKKT 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0722 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Lal23g0722 241 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
Lal23g0722 241 MobiDBLite consensus disorder prediction 130 160 - -
Lal23g0722 241 MobiDBLite consensus disorder prediction 143 160 - -
Lal23g0722 241 Gene3D Immunoglobulins 1 130 IPR013783 -
Lal23g0722 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
Lal23g0722 241 Coils Coil 177 211 - -
Lal23g0722 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 239 IPR016763 GO:0005789
Lal23g0722 241 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 239 - -
Lal23g0722 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0722 Lal-Chr23 9841408 9845456 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0722 - - lang:109330584 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0722 23 9841408 9845456 Lal23g0722 23 9841408 9845456 ECH
Lal15g0878 15 6613177 6617095 Lal23g0722 23 9841408 9845456 LSH
Lal16g0329 16 1977852 1981686 Lal23g0722 23 9841408 9845456 PCT
Lal15g0878 15 6613177 6617095 Lal23g0722 23 9841408 9845456 PCT
Lal23g0722 23 9841408 9845456 Lal15g0241 15 1657953 1661626 PCT
Lal23g0722 23 9841408 9845456 Lal23g1240 23 13581634 13585528 PCT