Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0329 ATGAACACTGCGGAACTTCTCAGCATCGATCCTCACGAACTTAAGTTCGTTTTTGAGCTGAAGAAGCAGATCTCGTCTTCTCTTCAATTGTCAAATAACACCGACAATTATGTAGCTTTCAAGGTGAAAACTACCAATCCGAAGAAGTACTGTGTTCGTCCAAACACTGGAATTATCTTGCCTCGATCTACATGTGATGTTATGGTTACCATGCAAGCACAAAAGGAAGCTCCACCTGATTTGGTATGCAAGGATAAGTTTCTTCTGCAAAGCGTAAAAACACATGATGGAGCTACCACAAAGGATATTTCTGCAGAAATGTTCAACAAAGAATTAGGGCATGTGGTTGAGGAATCCAAGTTGAAAGTGGTCTATGTTGCTCCACCTCAACCACCATCTCCAGTTGCAGAAGGTTCTGAGGAAGGGTCATCACCAAGAGGTTCAGTTTCAGAAAATGTAAATGTCAATGGTGCTGACTCCACAACAGTAGCAAGAGCATTCACTGAACGACATGAGGCTCCAGAAAAATCTGCTGAGGCAAAAGCTCTTATCTCAAGGCTGACTGAAGAAAAGAATAATGCAATCCAACAAAATAACAAGCTCCATCAGGAACTGGATCTGCTGAGACGTGAAAGCAATAAAAAACGTGGGGGTGTCTCGATGATCTTTGTCATATTAATTGGCTTACTTGGCATAATTATGGGGTATCTCATGAAGAAGACCTAA 726 0.416 MNTAELLSIDPHELKFVFELKKQISSSLQLSNNTDNYVAFKVKTTNPKKYCVRPNTGIILPRSTCDVMVTMQAQKEAPPDLVCKDKFLLQSVKTHDGATTKDISAEMFNKELGHVVEESKLKVVYVAPPQPPSPVAEGSEEGSSPRGSVSENVNVNGADSTTVARAFTERHEAPEKSAEAKALISRLTEEKNNAIQQNNKLHQELDLLRRESNKKRGGVSMIFVILIGLLGIIMGYLMKKT 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0329 241 MobiDBLite consensus disorder prediction 129 159 - -
Lal16g0329 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 239 IPR016763 GO:0005789
Lal16g0329 241 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 239 - -
Lal16g0329 241 Gene3D Immunoglobulins 1 130 IPR013783 -
Lal16g0329 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Lal16g0329 241 Coils Coil 177 211 - -
Lal16g0329 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Lal16g0329 241 MobiDBLite consensus disorder prediction 143 159 - -
Lal16g0329 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
Lal16g0329 241 Pfam MSP (Major sperm protein) domain 7 110 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0329 Lal-Chr16 1977852 1981686 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0329 - - lang:109333499 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0329 16 1977852 1981686 Lal16g0329 16 1977852 1981686 ECH
Lal16g0329 16 1977852 1981686 Lal15g0878 15 6613177 6617095 LSH
Lal16g0329 16 1977852 1981686 Lal15g0878 15 6613177 6617095 PCT
Lal16g0329 16 1977852 1981686 Lal23g0722 23 9841408 9845456 PCT