Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0224 ATGGGCAATAGCATGGTCACACATAACAAGTACAAAAGTTTCATGTTCTTCATCAGAAAATACAAGGTTACAGAGCTAGTTCCACCTCAGGACCTCAAGGAAGTGTTTTCCAAGTTCACCGGAGGAGGGTCCTACGTGTCGGCCGAGCAGCTCCACCAGTTCCTGGTGGAGCATCAGGCTGAGAAGGACTGCACCTTATTGGATGCAGAGAAAATTGTTAAGAAGGTTTTGCAAATTAGAATAAGGCCTCAACAGGAAACTGTTAATGTTGATGAAAAAAATATAGAACAGAAACTCACCCTTGATGACATCTTCTATTTTTTGCGTATGGATGATTTCAACAATCCCTTGAAAGCTGAGGTACATCATGATATGAATGCTCCACTGTCACATTATTTCATATATGCAGGACATAATTCCTATCTCACTGGGAATCAACTAAGCAGTGATTGCAGCGAAAAGCCGATCATAAAGGCTTTGCAACGAGGTGTTCGAGTTATTGAACTGGATTTGTGGCCAACTTTCAATAAAGATGATATTAAAGTAGATCATGGATGGACTCTTACCACTCCAGTCTCAGCTATCAAATGTTTGGAGTCAATACGGGAATATGGTTTTGTTGCATCTCAGTACCCAATCATCATAACTATAGAAGACCACCTTACAAGAGATCTTCAAGCTAAATTTGCAGAAATGGCAACACAAATATTTGGAGAAATGCTTTATTATCCAGAGACAGATTGTTTAACAGAATTCCCTTCACCAGAATCATTGAAAAATAGAGTAATTATATCCACCAAACCCCCAAAAGAATGTTTTGAACACAACAGTATCAAGGATAATGACAACTTTCTTATGCTGAGTGGAAGTGAATCATCATCATCATCAGAATCACGGGGAAAAGAATCACCGGACTCTATGACTGGAGTGAAGATTGAGGGCACTATGGCTGGAGTGAAGTTTGAGGGCCCTATGGCTGAAGCGAAGTTTGAGGGCCCTATGGCTGAAGTGAAGATTGAGAGCACGAATGGAAGTGATTGCGACGAGGGGGACATAAACACGTGGGAATGTGATCATAAATCATACCAGCGGTGTTCGCCTGATTACAAACGCATAATTACAATCCGTAATAGGAAACTCAAGGGTAGTCTGAAGGATAAATTGAAAATTGATGGTGAGCTGAGACGCTTAAGTTGGAGTGAAACGACCCTTGAAAAGGCTTCTGAATCTCACGGAGCAGACATTGTTAGGTTCACACAGAAAAATATCCTCCGGGTATACCCAAACTTAACGCGTGTCAAATCCACAAATTTCAAGCCACATATTGGGTGGATGTATGGGGCTCAGATGGTTGCATTCAATATGCAGGGTCATGCCAAACCACTCTGGTTGATGCAGGGGATGTTCAAGGCAAATGGAGGATGCGGTTATATAAAAAAGCCTCCATGTCTGATGCAGGAACATCCATGTGACAATGAATTTGATCCTAAAAGGAAACAGCCAGTGAAGAAGAAGTTAAAGGTAAAAGTATACATGGGACATGGCTGGAACTTAGATTTCAGTCCTACACACTTTGATAAATTCTCTCCACCAGACTTTTTCACTAAGATTTGTATTGTTGGAGTGCCTGCTGATTATGCAAAGAAGAAAACAAAGGTAGTCATTGATAACTGGTTTCCTGTTTGGGATGAAGAGTTTGAATTCCCCTTGACTGTTCCAGAGCTTGCTTTGCTTCGGATACAAGTTATACACAAAGATCAAGGAAAGGGTGACTTTGGTGGGCAAACATGTTTGCCAGTGTCAGAGCTAAAACTTGGATTTCGTTCGGTCCCTTTGTATAACAAAAAAGGAGAGAAATTCAAATCTGTAAAGCTGTTAATGCAGTTTCAGTTTGAATGA 1899 0.4086 MGNSMVTHNKYKSFMFFIRKYKVTELVPPQDLKEVFSKFTGGGSYVSAEQLHQFLVEHQAEKDCTLLDAEKIVKKVLQIRIRPQQETVNVDEKNIEQKLTLDDIFYFLRMDDFNNPLKAEVHHDMNAPLSHYFIYAGHNSYLTGNQLSSDCSEKPIIKALQRGVRVIELDLWPTFNKDDIKVDHGWTLTTPVSAIKCLESIREYGFVASQYPIIITIEDHLTRDLQAKFAEMATQIFGEMLYYPETDCLTEFPSPESLKNRVIISTKPPKECFEHNSIKDNDNFLMLSGSESSSSSESRGKESPDSMTGVKIEGTMAGVKFEGPMAEAKFEGPMAEVKIESTNGSDCDEGDINTWECDHKSYQRCSPDYKRIITIRNRKLKGSLKDKLKIDGELRRLSWSETTLEKASESHGADIVRFTQKNILRVYPNLTRVKSTNFKPHIGWMYGAQMVAFNMQGHAKPLWLMQGMFKANGGCGYIKKPPCLMQEHPCDNEFDPKRKQPVKKKLKVKVYMGHGWNLDFSPTHFDKFSPPDFFTKICIVGVPADYAKKKTKVVIDNWFPVWDEEFEFPLTVPELALLRIQVIHKDQGKGDFGGQTCLPVSELKLGFRSVPLYNKKGEKFKSVKLLMQFQFE 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0224 632 Pfam C2 domain 505 606 IPR000008 -
Lal22g0224 632 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 397 483 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lal22g0224 632 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 123 267 - -
Lal22g0224 632 MobiDBLite consensus disorder prediction 284 309 - -
Lal22g0224 632 Pfam Phosphatidylinositol-specific phospholipase C, X domain 125 267 IPR000909 -
Lal22g0224 632 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 1 312 - -
Lal22g0224 632 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 334 632 - -
Lal22g0224 632 SMART plcy_3 369 485 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lal22g0224 632 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 505 631 IPR035892 -
Lal22g0224 632 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 334 632 IPR001192 GO:0035556
Lal22g0224 632 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 312 IPR001192 GO:0035556
Lal22g0224 632 CDD C2_PLC_like 511 632 - -
Lal22g0224 632 SUPERFAMILY EF-hand 5 125 IPR011992 -
Lal22g0224 632 SUPERFAMILY PLC-like phosphodiesterases 123 486 IPR017946 GO:0006629|GO:0008081
Lal22g0224 632 SMART plcx_3 123 267 IPR000909 -
Lal22g0224 632 Gene3D - 24 117 - -
Lal22g0224 632 SMART C2_3c 505 612 IPR000008 -
Lal22g0224 632 Gene3D Phosphatidylinositol (PI) phosphodiesterase 120 498 IPR017946 GO:0006629|GO:0008081
Lal22g0224 632 ProSiteProfiles C2 domain profile. 485 614 IPR000008 -
Lal22g0224 632 Gene3D C2 domain 499 632 IPR035892 -
Lal22g0224 632 MobiDBLite consensus disorder prediction 284 303 - -
Lal22g0224 632 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 398 484 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lal22g0224 632 PRINTS Phospholipase C signature 128 146 IPR001192 GO:0035556
Lal22g0224 632 PRINTS Phospholipase C signature 154 174 IPR001192 GO:0035556
Lal22g0224 632 PRINTS Phospholipase C signature 251 268 IPR001192 GO:0035556
Lal22g0224 632 PRINTS Phospholipase C signature 423 444 IPR001192 GO:0035556
Lal22g0224 632 PRINTS Phospholipase C signature 444 462 IPR001192 GO:0035556
Lal22g0224 632 PRINTS Phospholipase C signature 598 608 IPR001192 GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0224 Lal-Chr22 1382403 1386172 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0224 11 632 Acyl Lipid Metabolism Gene Families AT2G40116 53.738 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0224 K05857 - gmx:100820253 911.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0224 22 1382403 1386172 Lal17g1572 17 17133247 17138214 ECH
Lal22g0359 22 2312828 2317264 Lal22g0224 22 1382403 1386172 ECH
Lal22g0224 22 1382403 1386172 Lal22g0224 22 1382403 1386172 ECH
Lal18g1371 18 16052088 16055736 Lal22g0224 22 1382403 1386172 LSH
Lal18g1371 18 16052088 16055736 Lal22g0224 22 1382403 1386172 PCT
Lal22g0224 22 1382403 1386172 Lal18g1371 18 16052088 16055736 PCT