Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1355 ATGAACGGTGGTGATAAGGTGGCCGCAGGTGGTGCTTCGGCGGGTCCACCGCAACCGCTGGATTGGAAATTCTCGCAGGTTTTTGGTGAGCGTACGGCTGGTGAAGAAGTTCAAGAAGTTTTGGAAACTTTTGCCGTAGTCGTATGGCGAGATTATGGTGGCAGAGGTTTGGACTTGGAGACAGATCATGTGGACATAATTTCTGCTATCGAATTCGACAAGTCTGGCGATCATCTTGCTACTGGTGATCGTGGTGGTCGAGTTGTTCTCTTTGAGAGGACAGATGCAAAAGATCATGGTGGATCGAAAAGCGATTTGGAGAAGATGGACTATTCTATGAATAGGCATCCTGAGTTCCGTTATAAAACAGAGTTCCAGAGTCATGAGCCTGAGTTTGACTACCTTAAGAGCTTGGAAATAGAAGAGAAAATAAACAAAATAAAATGGTGCCAAACGGCTAATGGTGCTCTCTTCCTTCTATCTACAAATGATAAAACCATCAAATTTTGGAAGGTTCAAGAAAAGAAGGTGAAGAAAATTTCTGAAATGAATGTTGATCCTTCAAAAGCAATGGGGAATGGTTCTATTGCTAGCTCAAGTAGTTCCGGTAACTCTAGGACACATCTTGCAAATGGAGGATCTCTGGATAGGTCATACAGTTTTCTAAGCAATGACTTCTCATTTCCTCCAGGAGGCATACCTTCATTAAGATTACCCTCGGTAGTCAGCCACGAGACCAGTCTTGTGGCTCGGTGTCGTAGAGTATATGCCCATGCTCATGATTATCATATCAATTCTATATCAAGTAACAGTGATGGTGCAACTTTCATATCGGCTGATGATTTGCGAATAAATCTTTGGAACCTGGAAATTAGCAATCAAAGTTTTAATATTGTTGATGTTAAGCCTGCAAATATGGAGGATCTGACGGAGGTTATAACATCAGCAGAATTTCACCCTACGCATTGTAATACATTGGCATATAGCAGTTCAAAGGGTTCAATTCGTCTTGTTGATTTGCGGCAGTCAGCATTATGTGATTCTCATGCCAAAATATTCACTGACAGTTACCTTCTATACAGATTTCAGGAACAAGAGGCCTCTGGGTCCAGATCATTTTTCACCGAGATTATTGCATCTGTCTCTGACATAAAGTTCGGGAAGGAGGGAAGATATATACTTAGTCGTGATTACATGACTTTAAAGTTATGGGACATCAATATGGATTCTGGCCCGGTTGCAACGTTTCAAGTTCACGAACATTTAAGACCGAAGCTTTGTGATTTATATGAAAATGATTCAATTTTTGACAAGTTTGAGTGTTGCCTGAGTGGTGATGGATTGCGTGTTGCTACTGGTTCGTACAGCAATCTATTCCGTGTGTTTGGTTGTTCCCCGGGAAGTACCGAGGCTACAACTTTGGAAGCTAGTAAAAATCCAATGAGACGACAAGTTCCAACCCCATCAAGGCCTTCTAGAACACTAGGAAACAGTATAACACGAGTTGTAAGACGCGGAGCCGAAAACACCGGTGTTGATGCAAATGGGAATTCATTTGACTTCACAACAAAGTTGCTGCACTTAGCATGGCACCCAAGTGAAAACTCAATTGCTTGTGCTGCTGCAAATAGCCTATACATGTATTATGCTTAA 1653 0.4192 MNGGDKVAAGGASAGPPQPLDWKFSQVFGERTAGEEVQEVLETFAVVVWRDYGGRGLDLETDHVDIISAIEFDKSGDHLATGDRGGRVVLFERTDAKDHGGSKSDLEKMDYSMNRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIKWCQTANGALFLLSTNDKTIKFWKVQEKKVKKISEMNVDPSKAMGNGSIASSSSSGNSRTHLANGGSLDRSYSFLSNDFSFPPGGIPSLRLPSVVSHETSLVARCRRVYAHAHDYHINSISSNSDGATFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNTLAYSSSKGSIRLVDLRQSALCDSHAKIFTDSYLLYRFQEQEASGSRSFFTEIIASVSDIKFGKEGRYILSRDYMTLKLWDINMDSGPVATFQVHEHLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFRVFGCSPGSTEATTLEASKNPMRRQVPTPSRPSRTLGNSITRVVRRGAENTGVDANGNSFDFTTKLLHLAWHPSENSIACAAANSLYMYYA 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1355 550 Gene3D - 357 545 IPR015943 GO:0005515
Lal1g1355 550 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 71 91 IPR000009 GO:0000159|GO:0019888
Lal1g1355 550 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 118 146 IPR000009 GO:0000159|GO:0019888
Lal1g1355 550 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 147 175 IPR000009 GO:0000159|GO:0019888
Lal1g1355 550 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 260 287 IPR000009 GO:0000159|GO:0019888
Lal1g1355 550 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 288 315 IPR000009 GO:0000159|GO:0019888
Lal1g1355 550 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 316 344 IPR000009 GO:0000159|GO:0019888
Lal1g1355 550 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 519 548 IPR000009 GO:0000159|GO:0019888
Lal1g1355 550 MobiDBLite consensus disorder prediction 1 20 - -
Lal1g1355 550 PIRSF PPA2_B55 14 53 IPR000009 GO:0000159|GO:0019888
Lal1g1355 550 PIRSF PPA2_B55 41 550 IPR000009 GO:0000159|GO:0019888
Lal1g1355 550 Gene3D - 57 225 IPR015943 GO:0005515
Lal1g1355 550 SUPERFAMILY WD40 repeat-like 61 542 IPR036322 GO:0005515
Lal1g1355 550 MobiDBLite consensus disorder prediction 183 209 - -
Lal1g1355 550 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B 52 550 - -
Lal1g1355 550 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B 1 40 - -
Lal1g1355 550 SMART WD40_4 409 463 IPR001680 GO:0005515
Lal1g1355 550 SMART WD40_4 299 339 IPR001680 GO:0005515
Lal1g1355 550 SMART WD40_4 131 171 IPR001680 GO:0005515
Lal1g1355 550 SMART WD40_4 53 92 IPR001680 GO:0005515
Lal1g1355 550 SMART WD40_4 249 288 IPR001680 GO:0005515
Lal1g1355 550 MobiDBLite consensus disorder prediction 191 209 - -
Lal1g1355 550 Pfam WD domain, G-beta repeat 252 288 IPR001680 GO:0005515
Lal1g1355 550 Gene3D - 247 356 IPR015943 GO:0005515
Lal1g1355 550 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 1 40 IPR000009 GO:0000159|GO:0019888
Lal1g1355 550 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 52 550 IPR000009 GO:0000159|GO:0019888
Lal1g1355 550 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 1. 131 145 IPR018067 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1355 Lal-Chr1 15340587 15349274 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1355 K04354 - gmx:100799449 912.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1355 1 15340587 15349274 Lal20g1109 20 15265319 15277263 ECH
Lal1g1355 1 15340587 15349274 Lal1g1355 1 15340587 15349274 ECH
Lal20g1109 20 15265319 15277263 Lal1g1355 1 15340587 15349274 LSH
Lal25g0316 25 2161149 2168775 Lal1g1355 1 15340587 15349274 PCT
Lal10g1104 10 17890023 17897233 Lal1g1355 1 15340587 15349274 PCT
Lal8g0276 8 1849861 1856832 Lal1g1355 1 15340587 15349274 PCT
Lal1g1355 1 15340587 15349274 Lal25g0316 25 2161149 2168775 PCT
Lal1g1355 1 15340587 15349274 Lal10g1104 10 17890023 17897233 PCT
Lal1g1355 1 15340587 15349274 Lal8g0276 8 1849861 1856832 PCT