Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0759 ATGACGGAGCTCCAAACCAAACCTGAAACTGCTCCGGCGGTGGACCCTCACCCTCCTCTAGCTGAGACTTCACCTCTTGCCGTCGTCGTTGATGAGAAAGCGGTGATTCCAACGGAACCGGTGGTGCCGGTAGAGGAAACCAAGGCTCTTGTTGTTGTTGAGAAAGAGAAGATACCAGATCCTGTACCTGCACATAAGAAAGGATCACTTGATAGAGATATTGCTCTTGCAGATTTAGACAAAGAGAAAAAATTGTCTTATGTAAAGGCATGGGAAGAAAGTGAAAAATCCAAGGCAGAGAATAAAGCTCAAAAAAATCTCTCTGCTGTTGCTGCTTGGGAAAACAGCAAGAAAGCAAATCTTGAAGCTGAGCTGAGAAAAATTGAGGAACAACTTGAGAAAAAGAAAGCAGAATATGGTGAAAAAATGAAAAACAAGATAGCCGCGGTTCACAAGGAAGCAGAAGAGAAGAGGGCAATGGTTGAAGCCAAGCGTGGTGAAGAACTTCTCAAGGCAGAGGAATTGGCTGCAAAATTTCGTGCAACTGGAACCACTCCAAAGAAGCACATTGGATGCTTTTAA 582 0.4416 MTELQTKPETAPAVDPHPPLAETSPLAVVVDEKAVIPTEPVVPVEETKALVVVEKEKIPDPVPAHKKGSLDRDIALADLDKEKKLSYVKAWEESEKSKAENKAQKNLSAVAAWENSKKANLEAELRKIEEQLEKKKAEYGEKMKNKIAAVHKEAEEKRAMVEAKRGEELLKAEELAAKFRATGTTPKKHIGCF 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0759 193 Coils Coil 111 145 - -
Lal18g0759 193 Pfam Remorin, C-terminal region 83 188 IPR005516 -
Lal18g0759 193 PANTHER OS02G0117200 PROTEIN 1 193 - -
Lal18g0759 193 MobiDBLite consensus disorder prediction 1 25 - -
Lal18g0759 193 PANTHER CARBOXY-TERMINAL REGION REMORIN 1 193 - -
Lal18g0759 193 Pfam Remorin, N-terminal region 29 79 IPR005518 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0759 Lal-Chr18 9242929 9247590 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0759 - - gmx:100802984 250.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0759 18 9242929 9247590 Lal9g0805 9 5814530 5817595 ECH
Lal18g0759 18 9242929 9247590 Lal12g0048 12 329873 332718 ECH
Lal18g0759 18 9242929 9247590 Lal13g0036 13 246601 249484 ECH
Lal18g0759 18 9242929 9247590 Lal18g0759 18 9242929 9247590 ECH
Lal16g1227 16 8568780 8569215 Lal18g0759 18 9242929 9247590 ECH
Lal6g0942 6 6564308 6568207 Lal18g0759 18 9242929 9247590 LSH
Lal22g0821 22 6138375 6142740 Lal18g0759 18 9242929 9247590 LSH
Lal9g1409 9 15871459 15878798 Lal18g0759 18 9242929 9247590 PCT
Lal6g0942 6 6564308 6568207 Lal18g0759 18 9242929 9247590 PCT
Lal18g0759 18 9242929 9247590 Lal9g1409 9 15871459 15878798 PCT
Lal18g0759 18 9242929 9247590 Lal6g0942 6 6564308 6568207 PCT