Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0942 ATGACGGAGTCCCTAACCAATCCTGAAACAGCTCCGGCTCCGACTCTAGCTCCGGCTCCGGTGGTAGACCCTGAGCCTCCTCTGGCTGAGGCTCCACCGCTTGCTGCCGCTGTTGATGAGAAACCGGTTGTTCCACCAGCACCGGTGGTGGTACCGGTAGAGGAAACCAAGGCTCTTGCTATTGCTGAGAAAGAGAAGACACCAGATCCTGTAAATAAGAAAGTAACTCTTGATAGAGATATTGCTCTTGCAGAAGTAGAGAAGGAGAAAAGGTTGTCTTATGTGAAGGCATGGGAAGAAAGCGAAAAATCGAAGGCCGAGAATAAAGCTCAGAAACAGTTCTCTGCTGTTGATTCTTGGGAGAATAGCAAGAAAGCAACTCTTGAAGCTGAGCTGAGAAAAATTGAGGAACAACTAGAGAAAAAGAAAGCAGAATATGGTGAAAAAATGAAAAACAAGATAGCTTTGGTTCACAAACAAGCAGAAGAAAAGAGGGCAATGGTTGAAGCCAAACGTGGTGAAGAATTTCTCAAGGCAGAGGAATTGGCTGCAAAATTTCGTGCAACTGGAAACACTCCAAAGAAGTACATTGGTTGCTTTTGA 603 0.4544 MTESLTNPETAPAPTLAPAPVVDPEPPLAEAPPLAAAVDEKPVVPPAPVVVPVEETKALAIAEKEKTPDPVNKKVTLDRDIALAEVEKEKRLSYVKAWEESEKSKAENKAQKQFSAVDSWENSKKATLEAELRKIEEQLEKKKAEYGEKMKNKIALVHKQAEEKRAMVEAKRGEEFLKAEELAAKFRATGNTPKKYIGCF 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0942 200 MobiDBLite consensus disorder prediction 13 31 - -
Lal6g0942 200 Coils Coil 125 152 - -
Lal6g0942 200 Pfam Remorin, N-terminal region 38 86 IPR005518 -
Lal6g0942 200 PANTHER OS02G0117200 PROTEIN 22 200 - -
Lal6g0942 200 Pfam Remorin, C-terminal region 90 195 IPR005516 -
Lal6g0942 200 MobiDBLite consensus disorder prediction 1 34 - -
Lal6g0942 200 PANTHER CARBOXY-TERMINAL REGION REMORIN 22 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0942 Lal-Chr6 6564308 6568207 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0942 - - gmx:100802984 225.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g1409 9 15871459 15878798 Lal6g0942 6 6564308 6568207 LSH
Lal6g0942 6 6564308 6568207 Lal22g0821 22 6138375 6142740 LSH
Lal6g0942 6 6564308 6568207 Lal18g0759 18 9242929 9247590 LSH
Lal9g1409 9 15871459 15878798 Lal6g0942 6 6564308 6568207 PCT
Lal6g0942 6 6564308 6568207 Lal6g0942 6 6564308 6568207 PCT
Lal6g0942 6 6564308 6568207 Lal22g0821 22 6138375 6142740 PCT
Lal6g0942 6 6564308 6568207 Lal18g0759 18 9242929 9247590 PCT
Lal6g0942 6 6564308 6568207 Lal9g1409 9 15871459 15878798 PCT
Lal22g0821 22 6138375 6142740 Lal6g0942 6 6564308 6568207 PCT
Lal18g0759 18 9242929 9247590 Lal6g0942 6 6564308 6568207 PCT