Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0048 ATGACTGAGGAACAACCCAAAAAGGTAGAATCTGAATCAGCATCGAATCCTCCACCTGAACCTGTTGTTGTTCATCATGAGGCTCCAAAGGATGTGTCTGAGGAGAAACCTCTTGATGACTCCAAAGCTCTTGTTATAGTTGACAAGCCTCATGAACCTGCTGTAGAGAAACCAGTTGAGGAATCTGTCAACAGAGATGTTGTTCTCGAAAAAGTTGCAACAGAAAAGAGACTATCACTAATCAAAGCATGGGAAGAAAGTGAAAAATCAAAGGCAGAGAACAAGGCTCACAAAAAGCTTGCAGAAATTTCAGCATGGGAGAAGACTAAGAAAGCTAATAAGGAGGCTGAATTGAAGAAGATTGAAGAACAACTGGAGAAGAAAAAGGCAGAGTATGCAGAGAAATTGAAAAACAAAATAGCTACAATACACAAGGAAGCTGAAGAAAAAAGGGCAATAATTGAGGCCCAAAAAGGAGAAGATTTACTGAAGGCAGAAGAGTTAGCTGCAAAGTACAGGGCTACTGGAACAGAACCAAAGAAGCTCCTTGGTTTTTTCTGA 561 0.4046 MTEEQPKKVESESASNPPPEPVVVHHEAPKDVSEEKPLDDSKALVIVDKPHEPAVEKPVEESVNRDVVLEKVATEKRLSLIKAWEESEKSKAENKAHKKLAEISAWEKTKKANKEAELKKIEEQLEKKKAEYAEKLKNKIATIHKEAEEKRAIIEAQKGEDLLKAEELAAKYRATGTEPKKLLGFF 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0048 186 Coils Coil 111 153 - -
Lal12g0048 186 MobiDBLite consensus disorder prediction 1 40 - -
Lal12g0048 186 Pfam Remorin, C-terminal region 76 181 IPR005516 -
Lal12g0048 186 MobiDBLite consensus disorder prediction 24 40 - -
Lal12g0048 186 PANTHER OS02G0117200 PROTEIN 1 186 - -
Lal12g0048 186 Pfam Remorin, N-terminal region 7 72 IPR005518 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0048 Lal-Chr12 329873 332718 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0048 - - gmx:100305501 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0048 12 329873 332718 Lal13g0036 13 246601 249484 ECH
Lal18g0759 18 9242929 9247590 Lal12g0048 12 329873 332718 ECH
Lal9g1409 9 15871459 15878798 Lal12g0048 12 329873 332718 ECH
Lal16g1227 16 8568780 8569215 Lal12g0048 12 329873 332718 ECH
Lal12g0048 12 329873 332718 Lal12g0048 12 329873 332718 ECH
Lal12g0048 12 329873 332718 Lal13g0036 13 246601 249484 LSH