Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0805 ATGACAGAACAACAACCTAAGATAGTTGAGTCAGTAACACCATCTACTCATGTTGTTGCTCCAAAGGATGTGGTGGCTGAGGAGAAATCTGTAATTCCATTTTCTCCTTCAGATTCTGAGCCTGATGATTCCAAAGCCCTTTTCATATTTGAGAAGATTCAAGGCGTCGCCGATGAGAAACTATTCGAGGGCTCTGTCAACCGAGATGTAGCGCTTGCAAGAGTCGCGACTGAGAAGAGGTTGTCACTGATAAAGGCATGGGAAGAAAGTGAGAAATCAAAAGCAGAAAACAAAGCTCACAAAAAACATATAGCCATTGATGCTTGGGAGAACAGTAAGAAAGCTGCTGTGGAAGCTGAATTGAGAATGATTGAAGAACAATTGGAGAAGAAAAAGGCAGAATATGCTGAGGAAATTAAAAATAGAATAGCTAAATTCCATAAGGAAGCTGAAGAAAATAGGGCAATTGTTGAGGCAAAAAAAGGGGAAGAACTGGTGAAGGCAGAAGAGATAGCTACAAAGCACAGGGCAAGTGGAACAATTCCAAAGAAACTCCTTGGTTATTTCAAATGCTTCAGTATTGAAGTCTGA 591 0.4061 MTEQQPKIVESVTPSTHVVAPKDVVAEEKSVIPFSPSDSEPDDSKALFIFEKIQGVADEKLFEGSVNRDVALARVATEKRLSLIKAWEESEKSKAENKAHKKHIAIDAWENSKKAAVEAELRMIEEQLEKKKAEYAEEIKNRIAKFHKEAEENRAIVEAKKGEELVKAEEIATKHRASGTIPKKLLGYFKCFSIEV 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0805 196 Pfam Remorin, C-terminal region 79 184 IPR005516 -
Lal9g0805 196 Pfam Remorin, N-terminal region 22 75 IPR005518 -
Lal9g0805 196 PANTHER REMORIN 1.4 8 190 - -
Lal9g0805 196 PANTHER OS02G0117200 PROTEIN 8 190 - -
Lal9g0805 196 Coils Coil 114 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0805 Lal-Chr9 5814530 5817595 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0805 - - gmx:100500457 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0759 18 9242929 9247590 Lal9g0805 9 5814530 5817595 ECH
Lal9g1409 9 15871459 15878798 Lal9g0805 9 5814530 5817595 ECH
Lal16g1227 16 8568780 8569215 Lal9g0805 9 5814530 5817595 ECH
Lal9g0805 9 5814530 5817595 Lal9g0805 9 5814530 5817595 ECH