Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0821 ATGACGGTGCTCCAAACCAACCATGAAACAGCTCCGGCTGAGGCACCACCTGTTGCCTCCGCCGTTCACGACAAGGTAGTGGTTCCACCACCACCGGCACCCGTGCCGGAGGAGGAAACCAAGGCTCTTGCTATTGTTGAGAAAGAGAAGATACCAGATCCTGTACCTGTACATAAGAAAGGATCCCTTGATAGAGATATTGCTCTTGCAGAAGTAGAGAAAGAGAAAAAGTTGTCTTATGTGAAGGCATGGGAAGAAAGTGAAAAATCCAAAGCAGAGAATAAAGCTCAAAAGCAGCTTTCTGCAGTTGCTGCTTGGGAAAACAGCAAGAAAGCAACTCTTGAAGCTGAGCTGAGAAAAATTGAGGAACAAATGGAGAAAAAGAAAGCAGAATATGGTGAAAAAATGAAAAACAAGATAGGCTCAGTTCACAAACAAGCAGAAGAGAAGAGGGCAATGGTTGAAGCCAAGCGTGGTGAAGAATTTCTAAAGGCAGAGGAATTGGCTGCAAAATTTCGTGCAACTGGAACCACTCCAAAGAAGCACATTGGATGCTTTTAA 561 0.4456 MTVLQTNHETAPAEAPPVASAVHDKVVVPPPPAPVPEEETKALAIVEKEKIPDPVPVHKKGSLDRDIALAEVEKEKKLSYVKAWEESEKSKAENKAQKQLSAVAAWENSKKATLEAELRKIEEQMEKKKAEYGEKMKNKIGSVHKQAEEKRAMVEAKRGEEFLKAEELAAKFRATGTTPKKHIGCF 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0821 186 Coils Coil 104 138 - -
Lal22g0821 186 PANTHER CARBOXY-TERMINAL REGION REMORIN 1 186 - -
Lal22g0821 186 Pfam Remorin, N-terminal region 23 72 IPR005518 -
Lal22g0821 186 Pfam Remorin, C-terminal region 76 181 IPR005516 -
Lal22g0821 186 MobiDBLite consensus disorder prediction 1 36 - -
Lal22g0821 186 PANTHER OS02G0117200 PROTEIN 1 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0821 Lal-Chr22 6138375 6142740 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0821 - - gmx:100802984 236.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0942 6 6564308 6568207 Lal22g0821 22 6138375 6142740 LSH
Lal22g0821 22 6138375 6142740 Lal18g0759 18 9242929 9247590 LSH
Lal9g1409 9 15871459 15878798 Lal22g0821 22 6138375 6142740 PCT
Lal6g0942 6 6564308 6568207 Lal22g0821 22 6138375 6142740 PCT
Lal22g0821 22 6138375 6142740 Lal9g1409 9 15871459 15878798 PCT
Lal22g0821 22 6138375 6142740 Lal6g0942 6 6564308 6568207 PCT