Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1844 ATGAGCTGGTCTGGAGGAGATTGGATGTGTGGTGCTTGTGAGCACATAAACTTCAAAAAGAGGGATGCATGCCAAAGTTGTGGGTACCCAAAGTTTGGAGGCCCTGACCCATCAACTTATCAATACAACAAGAGTGAAACACTGGCAGGGGACTGGTTTTGTACCGGTATGAACTGCGGAGCTCACAACTACGCCAGCCGATCAAACTGCTATAGATGTGGTGCATTGAAAGATGACTATTCTTCTGGATATGGAGGAAACATGGCAGGCTCTGGAGGATATGGATCTGATTGTAGTTTACCCCCTGGATGGAAGACTGGTGACTGGATTTGCCCAAGATATGGATGTGGAGTGCATAATTATGCAAGCAGGGCAGAATGCTTCAAATGCAAAATGTTGAGGGATTTTGGTGAGAAAAGTTTAGTGGTGCACACTGAAAGAAGAAACTTCAGAAGACATGCAATATCATTGATTTCCCTTGACATCTTTTTTCTCCAAACAACACTTTGTCTTGCTTTCCTTATGTTAAGCTCTATGTTAATCATAGATGCAGGCCCTCAGTTAGAATCATGGCAAAGTGCAAATGATGAAGATAGAGATTTATTGAGTTATTTCTGTTCCAGTGGTCCAAAAGAATGTTTTGCATGGTTCATAGATAAGGCAGAGAATTTTGACCATGCCATGGAAAGCCATGAGCAATAG 702 0.4245 MSWSGGDWMCGACEHINFKKRDACQSCGYPKFGGPDPSTYQYNKSETLAGDWFCTGMNCGAHNYASRSNCYRCGALKDDYSSGYGGNMAGSGGYGSDCSLPPGWKTGDWICPRYGCGVHNYASRAECFKCKMLRDFGEKSLVVHTERRNFRRHAISLISLDIFFLQTTLCLAFLMLSSMLIIDAGPQLESWQSANDEDRDLLSYFCSSGPKECFAWFIDKAENFDHAMESHEQ 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1844 233 ProSitePatterns Zinc finger RanBP2-type signature. 8 27 IPR001876 -
Lal14g1844 233 Gene3D - 1 35 - -
Lal14g1844 233 Gene3D - 102 135 - -
Lal14g1844 233 Gene3D - 40 79 - -
Lal14g1844 233 ProSiteProfiles Zinc finger RanBP2 type profile. 48 79 IPR001876 -
Lal14g1844 233 ProSiteProfiles Zinc finger RanBP2 type profile. 105 136 IPR001876 -
Lal14g1844 233 SMART zf_4 50 76 IPR001876 -
Lal14g1844 233 SMART zf_4 6 30 IPR001876 -
Lal14g1844 233 SMART zf_4 107 133 IPR001876 -
Lal14g1844 233 SUPERFAMILY Ran binding protein zinc finger-like 3 33 IPR036443 -
Lal14g1844 233 PANTHER ZINC FINGER, RANBP2-TYPE-RELATED 1 139 - -
Lal14g1844 233 ProSiteProfiles Zinc finger RanBP2 type profile. 4 33 IPR001876 -
Lal14g1844 233 Pfam Zn-finger in Ran binding protein and others 49 77 IPR001876 -
Lal14g1844 233 Pfam Zn-finger in Ran binding protein and others 105 131 IPR001876 -
Lal14g1844 233 ProSitePatterns Zinc finger RanBP2-type signature. 52 73 IPR001876 -
Lal14g1844 233 SUPERFAMILY Ran binding protein zinc finger-like 102 136 IPR036443 -
Lal14g1844 233 SUPERFAMILY Ran binding protein zinc finger-like 46 79 IPR036443 -
Lal14g1844 233 PANTHER ZINC FINGER PROTEIN 1 139 - -
Lal14g1844 233 ProSitePatterns Zinc finger RanBP2-type signature. 109 130 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1844 Lal-Chr14 18050329 18052470 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1844 - - gmx:100792208 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1844 14 18050329 18052470 Lal18g0202 18 1679690 1681474 ECH
Lal14g1844 14 18050329 18052470 Lal8g0216 8 1438777 1440076 ECH
Lal14g1844 14 18050329 18052470 Lal4g0223 4 1403488 1405609 ECH
Lal14g1844 14 18050329 18052470 Lal17g0239 17 1479046 1480638 ECH
Lal14g1844 14 18050329 18052470 Lal14g1844 14 18050329 18052470 ECH