Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0062 ATGGATGACAAGTTCCATGATTCCGATTCCGATTCCGACGACGCCAAACTCAGTTCCTCCTTCAAAAACAATGTCTACCGCCTCTTCGGCCGCGAACAGCCTGTCCACAAGGTCTTGGGCGGTGGAAAACATGCTGATATTTTGCTATGGAGAAACAGGAGAAGTTCAGGAATAGCAGTTGGAGCTGGCACTGCGTTGTGGTTGTTCTTTGAGTTGCTGGAATATCACCTCATCACTCTGCTTTGCCATTTATTGATTGTGTCTCTCGCAGCCCTTTTCTTGTGGTCCAATGCATCTATTTTTATCCACAAGTCTCCACTGCACATTCCACACATTGCAATTCCTGAGGAATGCATTGTTGAGATTGCCTCTGCTTTGAGAATTGAAATTAACCGAGCCTTCCTTGTTTTGCGGGAAATTGGAACTGGACGAGATTTAAAGAAGTTCCTTAGCGTTACTGGTGGATTATGGTTTATCTCGGTTATTGGGAATTGGTTCAACTTCCTCACCTTGTTTTACTTAGGCTTTCTATCACTGTTCACATTGCCACTGCTGTATGAGAAATATGAAGACCAGGTTGATGCATTTGGTGAGAAGGCAATGATTGAGATCAAGAAGCAGTATGCAGTGTTTGATGCTAAGGTTTTGAGCCAGATACCAATAGCTGGGTTGAAAAAGGATTAG 684 0.4371 MDDKFHDSDSDSDDAKLSSSFKNNVYRLFGREQPVHKVLGGGKHADILLWRNRRSSGIAVGAGTALWLFFELLEYHLITLLCHLLIVSLAALFLWSNASIFIHKSPLHIPHIAIPEECIVEIASALRIEINRAFLVLREIGTGRDLKKFLSVTGGLWFISVIGNWFNFLTLFYLGFLSLFTLPLLYEKYEDQVDAFGEKAMIEIKKQYAVFDAKVLSQIPIAGLKKD 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0062 227 Pfam Reticulon 45 199 IPR003388 -
Lal13g0062 227 ProSiteProfiles Reticulon domain profile. 44 227 IPR003388 -
Lal13g0062 227 PANTHER RETICULON 7 225 IPR045064 GO:0009617
Lal13g0062 227 PANTHER RETICULON-LIKE PROTEIN 7 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0062 Lal-Chr13 383553 385060 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0062 - K20721 gmx:100790190 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1004 6 7151188 7154932 Lal13g0062 13 383553 385060 ECH
Lal22g0895 22 7013299 7015551 Lal13g0062 13 383553 385060 ECH
Lal23g0387 23 6197770 6200126 Lal13g0062 13 383553 385060 ECH
Lal15g1421 15 16353989 16356512 Lal13g0062 13 383553 385060 ECH
Lal16g1179 16 8075389 8077851 Lal13g0062 13 383553 385060 ECH
Lal13g0062 13 383553 385060 Lal13g0062 13 383553 385060 ECH
Lal13g0062 13 383553 385060 Lal24g0061 24 375963 378405 LSH