Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1179 ATGGCTGATCATCATGAACATGAGGAAGTGAAGGGTGAATCGTTGTTGGATAAGATTTCAGGAATAGTCCATGACCACGATTCATCTTCTTCAGATTCTGATAACGAGAAGAAAAATGAGAAGAAAACCACTTCTCCTCCTTCTTCCATCAAATCCAAGGTTTTCAGGCTTTTCGGAAGGGAAAAACCCGTTCACCACGTCCTTGGTGGTGGAAAACCCGCTGATGTGTTTCTTTGGAGAAATAAGAAGATATCAGGAACTGTGCTAGGAGTTGCGACAGCTGCATGGGTTTTGTTTGAATTGCTTGAGTACCACTTCCTCACTTTGGTTTCTCACCTCCTGATATTTACACTGGCGGCATTGTTCCTGTGGTCAAATGCTTCTGCTTTTATCAGCAAGAGCACACCTAAGATCCCACAAGTACATATTCCAGAGGAACCTGTTTTGCAGTTTGCCTCTGCTCTTAGACTTGAGATCAATCGGGCTTTTGCTGTATTGAGGGAAATTGCATCAGGAAGAGATCTCAAGAAATTTCTTTCTGTAATTGCTGGATTATGGGTTTTATCTATTGTGGGGAGCTATGCCAACTTCTTGACATTGTTCTACATAGCTTTTGTTTTGCTTCACACTGTACCTGTGTTTTATGAGAAATATGAAGATCAGGTGGACTCTTTTGCTGAGAAGGCAACTGCTGAGATTAAGAAGCAATATGCAGTGTTCGATGCTAAGGTTTTGAGCAAGATCCCCAGAGGGCCTTTGAAAGAAAAAAAGAAAGATTGA 780 0.4167 MADHHEHEEVKGESLLDKISGIVHDHDSSSSDSDNEKKNEKKTTSPPSSIKSKVFRLFGREKPVHHVLGGGKPADVFLWRNKKISGTVLGVATAAWVLFELLEYHFLTLVSHLLIFTLAALFLWSNASAFISKSTPKIPQVHIPEEPVLQFASALRLEINRAFAVLREIASGRDLKKFLSVIAGLWVLSIVGSYANFLTLFYIAFVLLHTVPVFYEKYEDQVDSFAEKATAEIKKQYAVFDAKVLSKIPRGPLKEKKKD 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1179 259 Pfam Reticulon 74 229 IPR003388 -
Lal16g1179 259 ProSiteProfiles Reticulon domain profile. 73 259 IPR003388 -
Lal16g1179 259 PANTHER RETICULON-LIKE PROTEIN 1 257 - -
Lal16g1179 259 MobiDBLite consensus disorder prediction 1 49 - -
Lal16g1179 259 PANTHER RETICULON 1 257 IPR045064 GO:0009617
Lal16g1179 259 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1179 Lal-Chr16 8075389 8077851 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1179 - - gmx:100779587 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1179 16 8075389 8077851 Lal16g1179 16 8075389 8077851 ECH
Lal16g1179 16 8075389 8077851 Lal24g0061 24 375963 378405 ECH
Lal16g1179 16 8075389 8077851 Lal13g0062 13 383553 385060 ECH
Lal16g1179 16 8075389 8077851 Lal15g1421 15 16353989 16356512 LSH
Lal16g1179 16 8075389 8077851 Lal23g0387 23 6197770 6200126 LSH