Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g1004 ATGGCAGAAGAGACCGAGAGGAATGGAGAATCGTTGATTGAGAAGATAACAGAGAAGATTCACGGTCACGATTCTTCATCCTCCGACTCCGATTCTGATTCCGATACAAATGTTGCTTCATCTATTAAGGAAAAGGTGTTTCGTCTTTTCGGGAGAGAGAAGCCAGTTCATTCCGTTTTTGGCGGTGGAAAGGCTGCTGACGTGTTTTTGTGGAAGAACAAGAAGGTATCTGCAGGTGTACTTGGGGGAGCAACTGCTGTTTGGGTCTTTTTTGAGTTGCTAGAATATCACCTTCTCACTCTAGTCTGTCACATTTCAATTCTATTGCTTGCAATTCTGTTTTTGTGGTCCAATGCTCATACCTTCATCCACAAGTCTCCTCCTCACATCCCAGAAGTTCATCTCCCCGAAGAACCATTCCTGCAAGTTGCATCTGCATTGAGAATCGAAATCAACCGTGGATTTGCTGTCCTGCGTAATATTGGCTCTGGAAAAGATTTGAAGACATTCCTATTCGTCATTGCTGGGCTGTGGACTCTATCAATTGTGGGGAACTGGTTCAATTTCTTGACCTTGTTCTACATAATTTTTGTTTTATTGCACACGGTTCCTGTCGTGTATGCCAAGTATGAGGATAAAATAGACCCATTGGCAGAGAAGGCACTCATTGAGATCAAAAAGCAATACTCTGTCTTTGATGCGAAGGTCTTGAGTAAGATATTGAGTAAGATCCCAAAAGGTCTGAAAGACAAGTTAGCTTAG 762 0.4265 MAEETERNGESLIEKITEKIHGHDSSSSDSDSDSDTNVASSIKEKVFRLFGREKPVHSVFGGGKAADVFLWKNKKVSAGVLGGATAVWVFFELLEYHLLTLVCHISILLLAILFLWSNAHTFIHKSPPHIPEVHLPEEPFLQVASALRIEINRGFAVLRNIGSGKDLKTFLFVIAGLWTLSIVGNWFNFLTLFYIIFVLLHTVPVVYAKYEDKIDPLAEKALIEIKKQYSVFDAKVLSKILSKIPKGLKDKLA 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g1004 253 ProSiteProfiles Reticulon domain profile. 65 253 IPR003388 -
Lal6g1004 253 PANTHER RETICULON-LIKE PROTEIN 3 247 - -
Lal6g1004 253 PANTHER RETICULON 3 247 IPR045064 GO:0009617
Lal6g1004 253 Pfam Reticulon 66 221 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g1004 Lal-Chr6 7151188 7154932 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g1004 - - gmx:100779788 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g1004 6 7151188 7154932 Lal24g0061 24 375963 378405 ECH
Lal6g1004 6 7151188 7154932 Lal13g0062 13 383553 385060 ECH
Lal6g1004 6 7151188 7154932 Lal6g1004 6 7151188 7154932 ECH
Lal2g1351 2 11402982 11409526 Lal6g1004 6 7151188 7154932 LSH
Lal6g1004 6 7151188 7154932 Lal22g0895 22 7013299 7015551 LSH