Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0387 ATGGCGGATCATCACGAACATGAGGAAGTGAAGAGTGATTCGTTGTTGGAGAAAATTTCCATCAAAACAAAGGTTTTCAGAATATTCGGAAGGGAAAAGCCCGTTCACCACGTCCTTGGTGGTGGAAAGCCGGCTGATGTGCTTCTTTGGAGAAATAAGAAGATATCCGTAACTGTAATTGGAGTTGCGACAGCTATATGGGTTCTGTTTGAATTGCTGGAATACCACTTCCTCACTTTGACCTGTCACCTCTTGATATTTGCTCTGGCAGTATTGTTCTTGTGGTCAAATGCTTCCGCATTTATAAACAAGAGTACACCTAATATCCCACAAATACACATTCCAGAAGAACCTGTTTTGGAGTTTGCCTCTGCTCTTACACTTGAGATCAATAGGGCTTTTGCTGTATTGAAGGATATCGCATCAGGAAGGGATCTCAAGAAGTTTCTCTCAGTGATTGCTGGATTATGGGTTTTCTCTATTCTGGGGAGCTATGCCAACTTCTTGACCTTGTTCTACATAGCTTTTGTTTTGCTTCACACTTTACCTGTGCTTTATGAGAAATATGAAGATCAGGTGGACTCTTTTGCTGAGAAAGCAACTGCTGAGATTAAGAAGCAGTATGCTGTGTTTGATGCCAAGGTTTTGAGCAAGATCCCGAGAGGGCCTTCGAAAGATAAAAAGAAAGATTGA 693 0.417 MADHHEHEEVKSDSLLEKISIKTKVFRIFGREKPVHHVLGGGKPADVLLWRNKKISVTVIGVATAIWVLFELLEYHFLTLTCHLLIFALAVLFLWSNASAFINKSTPNIPQIHIPEEPVLEFASALTLEINRAFAVLKDIASGRDLKKFLSVIAGLWVFSILGSYANFLTLFYIAFVLLHTLPVLYEKYEDQVDSFAEKATAEIKKQYAVFDAKVLSKIPRGPSKDKKKD 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0387 230 PANTHER RETICULON 20 228 IPR045064 GO:0009617
Lal23g0387 230 Pfam Reticulon 45 200 IPR003388 -
Lal23g0387 230 ProSiteProfiles Reticulon domain profile. 44 230 IPR003388 -
Lal23g0387 230 PANTHER RETICULON-LIKE PROTEIN 20 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0387 Lal-Chr23 6197770 6200126 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0387 - - gmx:100811024 390.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0387 23 6197770 6200126 Lal23g0387 23 6197770 6200126 ECH
Lal23g0387 23 6197770 6200126 Lal24g0061 24 375963 378405 ECH
Lal23g0387 23 6197770 6200126 Lal13g0062 13 383553 385060 ECH
Lal16g1179 16 8075389 8077851 Lal23g0387 23 6197770 6200126 LSH
Lal15g1421 15 16353989 16356512 Lal23g0387 23 6197770 6200126 LSH