Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1421 ATGACAGATCATCATGAACACGATGAATTGAAGGATGAGTCGTTGTTGGAGAAGATTTCAGGGAAAATCCATAACCACGATTCATCTTCTTCTTCGGATTCAGATAACGAGAAGAAAACAAGTTCTTCTTCTCCTTCTTCCATCAAATCCAAGGTTTTCAGGCTTTTCGGAAGGGAAAAACCCGTTCATCATGTCCTTGGTGGTGGAAAACCGGCTGATGTGTTTCTTTGGAGAAATAAGAAGATATCAGTAGCTGTGCTTGGAGTCGCGACAGCTATATGGGTTCTGTTTGAATTGCTTGAATACCACCTCCTTACTTTAGTTTGTCACTTCCTGATATTTTTGCTGGCAGTATTGTTCTTGTGGTCCAATGCTTCCACTTTTATCAACAAGAGTACACCTAAGATCCCACAAGTACACATTCCAGAGGAATCCGTTTTGCAGTTTGCCTCTGCTCTTAGACTTGAGATCAATCAGGCTTTTTCTGTATTCAGAGAAATTGCATTAGGAAGGGATCTCAAGAAGTTTCTCTCAGTGATTGCTGGATTATGGGTTTTCTCTATTCTGGGGAGCTATGCCAACTTCTTGACATTGTTCTACATAGCATTTGTTTTGCTTCACACCGTACCTGTGCTTTATGAGAAATATGAAGATCAGGTGGACTCTTATGCTGAGAAGGCAAGTGTTGTGATTAAGAAGCAATATGCCGAGTTTGATGCCAAGGTTTTGAGCAAGATTCCCATAGGGCCTTCAAAAGATAAAAAGAAAGACTGA 774 0.407 MTDHHEHDELKDESLLEKISGKIHNHDSSSSSDSDNEKKTSSSSPSSIKSKVFRLFGREKPVHHVLGGGKPADVFLWRNKKISVAVLGVATAIWVLFELLEYHLLTLVCHFLIFLLAVLFLWSNASTFINKSTPKIPQVHIPEESVLQFASALRLEINQAFSVFREIALGRDLKKFLSVIAGLWVFSILGSYANFLTLFYIAFVLLHTVPVLYEKYEDQVDSYAEKASVVIKKQYAEFDAKVLSKIPIGPSKDKKKD 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1421 257 MobiDBLite consensus disorder prediction 23 46 - -
Lal15g1421 257 ProSiteProfiles Reticulon domain profile. 71 257 IPR003388 -
Lal15g1421 257 Pfam Reticulon 72 227 IPR003388 -
Lal15g1421 257 PANTHER RETICULON 1 255 IPR045064 GO:0009617
Lal15g1421 257 PANTHER RETICULON-LIKE PROTEIN 1 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1421 Lal-Chr15 16353989 16356512 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1421 - - gmx:100811024 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1421 15 16353989 16356512 Lal15g1421 15 16353989 16356512 ECH
Lal15g1421 15 16353989 16356512 Lal24g0061 24 375963 378405 ECH
Lal15g1421 15 16353989 16356512 Lal13g0062 13 383553 385060 ECH
Lal16g1179 16 8075389 8077851 Lal15g1421 15 16353989 16356512 LSH
Lal15g1421 15 16353989 16356512 Lal23g0387 23 6197770 6200126 LSH