Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0329 ATGGCCTGTGAAAATGACAAAAAAGGCCACCTATTACTTGCCCTAGGGCTAGTGCTCTGCGTCACCCTGACCTTCTTCCCAAGGGTGACCGAAGGGAGGGTGCCCTTTGCATGCGACCCTAGGAACGGGCTCACGAGGGGGTTCAAGTTCTGCAACACGCACGTGCCGATCCACGTGAGGGTGCAGGACCTCATAGCGAGGCTCACATTGCCGGAAAAAATTAGGCTCGTCGTTAACAATGCCATCGCCGTGCCCAGGCTCGGCATCCAAGGATACGAGTGGTGGTCGGAGGCGCTCCACGGCGTCTCCAATGTGGGCCCCGGCACCAAGTTCGGTGGGGCCTTCCCTGGCGCCACCATGTTCCCTCAAGTCATCTCAACCGCTGCTTCGTTTAATCAGTCGCTGTGGCAGGAAATTGGACGGGTGGTGTCTGATGAAGCAAGAGCAATGTACAACGGTGGACAGGCTGGTTTGACGTATTGGAGTCCTAATGTGAACATTTTCCGTGACCCACGGTGGGGCCGTGGCCAAGAGACTCCCGGCGAGGACCCGACATTGGCCGCAAAATACGCCGCCAGCTATGTCAAAGGACTCCAAGGCGATGGTGCCGGAAATCGCCTCAAGGTTGCTGCTTGTTGTAAACACTACACTGCCTATGATCTTGATAATTGGAATGGTGTGGACAGGTTTCATTTCAACGCCAAGGTGAGTAAACAGGATTTGGAGGACACTTATGATGTACCATTTAAAGCGTGCGTGTTGGAAGGGCAAGTGGCGAGTGTGATGTGCTCCTACAATCAGGTGAATGGCAAGCCCACGTGTGCTGACCCTGATCTCCTTCGCAACACTATTCGTGGCCAATGGGGCCTCAATGGGTATATTGTTTCGGACTGTGACTCGGTTGGAGTTTTCTTTGACAATCAACACTACACAAGAACACCTGAGGAGGCAGCTGCTGAGGCCATCAAAGCTGGCCTGGACTTGGATTGTGGCCCATTCTTGGCTATCCACACTGATTCTGCCATTAGGAAGGGACTCATTTCAGAAAATGATCTTAACCTTGCATTGGCCAACCTTATTACAGTCCAAATGAGATTGGGTATGTTCGACGGTGAACCATCAACCCAACCATTCGGAAACTTGGGCCCAAGAGATGTTTGCACCCCAGCCCATCAACAATTGGCCCTTGAAGCAGCTAGAGAGAGTATAGTCTTGCTACAAAATAAAGGAAACTCCCTACCACTATCCCCTTCAAGACTTCGTATCGTAGGAGTCATTGGACCCAATACGGATGCTACCGTTACAATGATCGGAAACTATGCTGGTGTGGCATGTGGTTATACCACCCCTTTGCAAGGAATTGCGAGGTATGTAAAGACGGCTCATCAAGTAGGTTGTAGGGGTGTCGCTTGCAGGGGAAATGAACTATTTGGTGCCGCAGAGATCATAGCTAGGCAAGTTGATGCGACTATTCTAGTAATGGGCCTTGACCAGACCATAGAAGCGGAAACAAGAGATAGGGTTGGGCTTCTCTTACCAGGCCTTCAACAAGAACTTGTGACTAGGGTGGCCAGGGCCGCTAAGGGCCCCGTTATCTTGGTCATCATGTCTGGTGGCCCGGTTGATGTTTCGTTTGCTAAAAATAACCCTAAGATTAGTGCCATTTTGTGGGTTGGTTATCCTGGTCAAGCTGGGGGAACTGCCATTGCTGATGTGATCTTTGGTGCAACCAACCCAGGAGGAAGGTTACCCATGACATGGTACCCACAAGGGTATTTGGCTAAAGTGCCGATGACAAACATGGACATGCGTCCAAACCCAGCAACAGGATACCCAGGAAGAACCTACAGATTCTACAAAGGACCAGTGGTGTTCCCATTTGGACATGGACTAAGTTACTCAAGATTCAGCCAAAGCTTGGCACTTGCTCCAAAACAGGTCTCGGTGCAAATACTGAGCCTCCAAGCCTTGACAAACTCAACCCTCTCAAGCAAAGCAGTGAAGGTGAGCCATGCCAATTGTGACGACTCATTGGAGACGGAATTCCACGTTGACGTGAAAAACGAAGGCTCAATGGATGGAACCCACACCCTTCTCATATTCTCGAAACCACCCCCGGGAAAATGGTCACAAATTAAACAGTTGGTGACCTTCCACAAGACCCATGTTCCTGCTGGCTCCAAGCAACGACTTAAGGTTAATGTTCATTCCTGCAAACACTTGTCCGTTGTGGACCAGTTTGGGGTTCGAAGAATCCCAACCGGTGAACATGAACTCCACATTGGTGATCTCAAACATTCAATTAATGTCCAAACTACGCATTGA 2325 0.5037 MACENDKKGHLLLALGLVLCVTLTFFPRVTEGRVPFACDPRNGLTRGFKFCNTHVPIHVRVQDLIARLTLPEKIRLVVNNAIAVPRLGIQGYEWWSEALHGVSNVGPGTKFGGAFPGATMFPQVISTAASFNQSLWQEIGRVVSDEARAMYNGGQAGLTYWSPNVNIFRDPRWGRGQETPGEDPTLAAKYAASYVKGLQGDGAGNRLKVAACCKHYTAYDLDNWNGVDRFHFNAKVSKQDLEDTYDVPFKACVLEGQVASVMCSYNQVNGKPTCADPDLLRNTIRGQWGLNGYIVSDCDSVGVFFDNQHYTRTPEEAAAEAIKAGLDLDCGPFLAIHTDSAIRKGLISENDLNLALANLITVQMRLGMFDGEPSTQPFGNLGPRDVCTPAHQQLALEAARESIVLLQNKGNSLPLSPSRLRIVGVIGPNTDATVTMIGNYAGVACGYTTPLQGIARYVKTAHQVGCRGVACRGNELFGAAEIIARQVDATILVMGLDQTIEAETRDRVGLLLPGLQQELVTRVARAAKGPVILVIMSGGPVDVSFAKNNPKISAILWVGYPGQAGGTAIADVIFGATNPGGRLPMTWYPQGYLAKVPMTNMDMRPNPATGYPGRTYRFYKGPVVFPFGHGLSYSRFSQSLALAPKQVSVQILSLQALTNSTLSSKAVKVSHANCDDSLETEFHVDVKNEGSMDGTHTLLIFSKPPPGKWSQIKQLVTFHKTHVPAGSKQRLKVNVHSCKHLSVVDQFGVRRIPTGEHELHIGDLKHSINVQTTH* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0329 774 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 403 636 IPR036881 GO:0004553|GO:0005975
Gso9g0329 774 SUPERFAMILY (Trans)glycosidases 49 402 IPR017853 -
Gso9g0329 774 Pfam Glycosyl hydrolase family 3 N terminal domain 115 350 IPR001764 GO:0004553|GO:0005975
Gso9g0329 774 Pfam Glycosyl hydrolase family 3 C-terminal domain 403 633 IPR002772 GO:0004553|GO:0005975
Gso9g0329 774 PRINTS Glycosyl hydrolase family 3 signature 121 140 IPR001764 GO:0004553|GO:0005975
Gso9g0329 774 PRINTS Glycosyl hydrolase family 3 signature 209 225 IPR001764 GO:0004553|GO:0005975
Gso9g0329 774 PRINTS Glycosyl hydrolase family 3 signature 283 301 IPR001764 GO:0004553|GO:0005975
Gso9g0329 774 PANTHER BETA-D-XYLOSIDASE 1 17 773 - -
Gso9g0329 774 Gene3D - 389 634 IPR036881 GO:0004553|GO:0005975
Gso9g0329 774 PANTHER SUGAR HYDROLASE-RELATED 17 773 IPR044993 GO:0009044|GO:0045493
Gso9g0329 774 Gene3D - 60 377 IPR036962 GO:0004553|GO:0005975
Gso9g0329 774 SMART Fn3_like_2 696 765 IPR026891 -
Gso9g0329 774 Gene3D Immunoglobulins 657 774 IPR013783 -
Gso9g0329 774 Pfam Fibronectin type III-like domain 701 763 IPR026891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0329 Gso-Chr9 3182011 3188645 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0329 1 771 Glycoside Hydrolase AT5G49360 71.374 0.0 1133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0329 - - gmx:100812823 1576.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2155 19 50031476 50033317 Gso9g0329 9 3182011 3188645 GST
Gso15g1195 15 11884352 11891144 Gso9g0329 9 3182011 3188645 GST
Gso9g0329 9 3182011 3188645 Gso7g0491 7 4934166 4935908 PCT
Gso9g0329 9 3182011 3188645 Gso16g0197 16 2305230 2307091 PCT
Gso7g0491 7 4934166 4935908 Gso9g0329 9 3182011 3188645 PCT
Gso16g0197 16 2305230 2307091 Gso9g0329 9 3182011 3188645 PCT