Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0491 ATGAAAGAGAAACTAAAGTACCCCTGTCTCTCTTCCTTGTTAACCCTCTTCCTCTGCATCTCCGCCACTTCCACTAACCCACACAACTCCCAAACCCAAACCCTTCTCCTCCATACCCTCCCTGACCCACCCACACTCTCATGGCCCGAATCCGCCACCGCAGAACCCGACCCGGAACCCACCACATCCCTCTCCCTTCACCACATAGACGCACTCTCCTTCAACAAAACCCCTTCCCAACTCTTCCACCTGAGACTCGAACGCGATGCCGCAAGGGTCAAAACCCTCACCCACTTAGCCGCAGCCACAAACAAAACCCGACCCGCCAACCCCGGGTCGGGTTTCAGCAGCTCCGTGGTATCGGGTCTCTCCCAAGGCAGCGGCGAGTACTTTACGCGCCTGGGCGTGGGAACTCCTCCGAAGTACCTCTACATGGTCCTCGACACCGGAAGCGACGTCGTTTGGCTCCAATGCAAGCCCTGCACCAAATGCTACTCCCAAACCGACCAAATCTTCGACCCATCAAAATCCAAATCCTTCGCCGGAATCCCCTGCTACTCCCCTCTCTGCCGCCGCCTCGACTCCCCCGGCTGCAGCCTAAAAAACAACCTTTGCCAGTACCAGGTTTCTTACGGTGACGGCTCCTTCACATTCGGAGATTTCTCAACGGAAACTCTCACGTTCCGACGCGCTGCAGTCCCGCGCGTGGCCATCGGCTGCGGCCACGACAACGAGGGACTCTTCGTGGGCGCCGCAGGTTTATTGGGCCTCGGTCGCGGCGGCTTGTCTTTTCCTACCCAGACCGGAACCCGGTTCAATAACAAATTCTCTTATTGCCTAACCGACCGAACCGCTTCCGCTAAACCGTCTTCCATTGTGTTCGGTGACTCCGCTGTTTCTCGAACCGCCCGGTTCACTCCTTTAGTTAAAAACCCTAAGCTTGATACATTTTATTATGTTGAGCTTCTTGGGATCAGCGTTGGCGGCGCGCCGGTTCGGGGAATTTCGGCTTCGTTCTTTCGGCTCGACTCTACCGGGAACGGTGGGGTGATTATTGACTCGGGGACTTCCGTCACGCGCCTCACGCGCCCTGCTTACGTGTCATTAAGAGACGCTTTTCGGGTCGGGGCTTCGCATTTGAAGCGCGCGCCTGAGTTCTCGCTTTTTGACACGTGCTATGATCTTTCGGGGCTGTCGGAGGTTAAGGTTCCGACCGTGGTTCTGCATTTTCGGGGCGCTGACGTGTCGTTGCCGGCGGCGAATTATCTCGTTCCGGTGGATAATAGCGGGAGCTTTTGCTTTGCGTTCGCCGGAACGATGAGTGGGTTGTCTATTATCGGGAACATTCAGCAGCAAGGGTTTCGGGTCGTGTTTGACTTGGCGGGTTCTCGGGTCGGGTTTGCCCCAAGAGGATGCGCGTGA 1422 0.5668 MKEKLKYPCLSSLLTLFLCISATSTNPHNSQTQTLLLHTLPDPPTLSWPESATAEPDPEPTTSLSLHHIDALSFNKTPSQLFHLRLERDAARVKTLTHLAAATNKTRPANPGSGFSSSVVSGLSQGSGEYFTRLGVGTPPKYLYMVLDTGSDVVWLQCKPCTKCYSQTDQIFDPSKSKSFAGIPCYSPLCRRLDSPGCSLKNNLCQYQVSYGDGSFTFGDFSTETLTFRRAAVPRVAIGCGHDNEGLFVGAAGLLGLGRGGLSFPTQTGTRFNNKFSYCLTDRTASAKPSSIVFGDSAVSRTARFTPLVKNPKLDTFYYVELLGISVGGAPVRGISASFFRLDSTGNGGVIIDSGTSVTRLTRPAYVSLRDAFRVGASHLKRAPEFSLFDTCYDLSGLSEVKVPTVVLHFRGADVSLPAANYLVPVDNSGSFCFAFAGTMSGLSIIGNIQQQGFRVVFDLAGSRVGFAPRGCA* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0491 473 Gene3D Acid Proteases 294 473 IPR021109 -
Gso7g0491 473 Gene3D Acid Proteases 112 293 IPR021109 -
Gso7g0491 473 ProSiteProfiles Peptidase family A1 domain profile. 130 468 IPR033121 -
Gso7g0491 473 PANTHER ASPARTYL PROTEASE FAMILY PROTEIN 2-LIKE 28 472 - -
Gso7g0491 473 PRINTS Pepsin (A1) aspartic protease family signature 136 156 IPR001461 GO:0004190|GO:0006508
Gso7g0491 473 PRINTS Pepsin (A1) aspartic protease family signature 350 361 IPR001461 GO:0004190|GO:0006508
Gso7g0491 473 PRINTS Pepsin (A1) aspartic protease family signature 444 459 IPR001461 GO:0004190|GO:0006508
Gso7g0491 473 SUPERFAMILY Acid proteases 123 472 IPR021109 -
Gso7g0491 473 Pfam Xylanase inhibitor C-terminal 318 468 IPR032799 -
Gso7g0491 473 CDD cnd41_like 129 472 IPR033873 -
Gso7g0491 473 PANTHER ASPARTYL PROTEASES 28 472 IPR001461 GO:0004190|GO:0006508
Gso7g0491 473 Pfam Xylanase inhibitor N-terminal 130 296 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0491 Gso-Chr7 4934166 4935908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0491 120 472 Miscellaneous Gene Families AT1G77480 27.720 6.36e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0491 K22683 - gmx:100791511 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0491 7 4934166 4935908 Gso7g0491 7 4934166 4935908 ECH
Gso7g0491 7 4934166 4935908 Gso16g0197 16 2305230 2307091 GST
Gso19g2155 19 50031476 50033317 Gso7g0491 7 4934166 4935908 PCT
Gso9g0329 9 3182011 3188645 Gso7g0491 7 4934166 4935908 PCT
Gso7g0491 7 4934166 4935908 Gso19g2155 19 50031476 50033317 PCT
Gso7g0491 7 4934166 4935908 Gso9g0329 9 3182011 3188645 PCT