Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1738 ATGTACAGAGAGCGAGGAGGCGTCGGATCCAAATCGGAGGTAACTTCCGTTGATCGGAAGCGAATCAACGACGTCCTCGATAAACAGCTTGAACGTTCCTCGCCTTCCACATCCAGAGCCGCCGCCATCAACGGCAAGGACCGCTCCTCCTCTTCCCTCTTAGCCGCCGCCAAGGACTCCCGCTCCGCCTCCGTCACCGCCCCTATCTCCAAGAATTCCAACGCTTCCGACGAGGAATCTGAAACAGACAGCGAGGAGTCTGATGTTAGTGGCTCCGACGGAGATGACACATCGTGGATCTCGTGGTTCTGCAATTTGAGAGGAAATGAATTCTTCTGCGAGGTTGATGACGATTACATCCAGGACGACTTCAACCTGTGTGGATTGAGCAGTCAAGTGCCTTACTATGATTATGCTCTGGATTTGATTTTGGATGTTGAATCGTCCCATGGTGACATGTTTACCGAGGAACAGAATGAGTTAATTGAATCAGCAGCCGAGATGCTTTATGGTCTGATTCATGCCCGGTACATATTGACAAGCAAAGGAATGGCTGCAATGCTGGACAAGTACAAGAACTATGATTTTGGCAGATGCCCACGAGTTTACTGCTCTGGACAACCTTGTATTCCAGTTGGTCAGTCAGACATCCCTAGGTCTAGTACTGTGAAAATATACTGCCCTAGGTGTGAAGACATTTACTATCCTCGGTCCAAGTATCAAGGCAACATTGATGGAGCTTATTTTGGAACTACATTTCCTCATCTGTTCTTGATGACTTATGGACAACTAAAGCCACAGAAACCATCACAGAGCTATGTCCCAAGAGTTTTTGGCTTCAAACTTCACAAGCCCTGA 858 0.4802 MYRERGGVGSKSEVTSVDRKRINDVLDKQLERSSPSTSRAAAINGKDRSSSSLLAAAKDSRSASVTAPISKNSNASDEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCIPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPSQSYVPRVFGFKLHKP* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1738 285 ProSitePatterns Casein kinase II regulatory subunit signature. 199 230 IPR000704 GO:0005956|GO:0019887
Gso1g1738 285 PANTHER CASEIN KINASE II SUBUNIT BETA 1 284 IPR000704 GO:0005956|GO:0019887
Gso1g1738 285 SUPERFAMILY Casein kinase II beta subunit 96 284 IPR035991 GO:0005956|GO:0019887
Gso1g1738 285 MobiDBLite consensus disorder prediction 1 94 - -
Gso1g1738 285 SMART CK_II_beta_2 98 281 IPR000704 GO:0005956|GO:0019887
Gso1g1738 285 MobiDBLite consensus disorder prediction 29 75 - -
Gso1g1738 285 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 91 195 IPR016149 GO:0005956|GO:0019887
Gso1g1738 285 PANTHER CASEIN KINASE II SUBUNIT BETA-2 1 284 - -
Gso1g1738 285 Pfam Casein kinase II regulatory subunit 98 281 IPR000704 GO:0005956|GO:0019887
Gso1g1738 285 PRINTS Casein kinase II regulatory subunit family signature 98 114 IPR000704 GO:0005956|GO:0019887
Gso1g1738 285 PRINTS Casein kinase II regulatory subunit family signature 115 129 IPR000704 GO:0005956|GO:0019887
Gso1g1738 285 PRINTS Casein kinase II regulatory subunit family signature 170 191 IPR000704 GO:0005956|GO:0019887
Gso1g1738 285 PRINTS Casein kinase II regulatory subunit family signature 195 216 IPR000704 GO:0005956|GO:0019887
Gso1g1738 285 PRINTS Casein kinase II regulatory subunit family signature 217 238 IPR000704 GO:0005956|GO:0019887
Gso1g1738 285 PRINTS Casein kinase II regulatory subunit family signature 245 262 IPR000704 GO:0005956|GO:0019887
Gso1g1738 285 Gene3D - 196 270 - -
Gso1g1738 285 MobiDBLite consensus disorder prediction 14 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1738 Gso-Chr1 54203014 54206554 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1738 K03115 - gmx:100799304 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1738 1 54203014 54206554 Gso1g1738 1 54203014 54206554 ECH
Gso1g1738 1 54203014 54206554 Gso11g0336 11 2818028 2821367 GST
Gso1g1738 1 54203014 54206554 Gso5g0577 5 6777857 6780720 PCT
Gso1g1738 1 54203014 54206554 Gso17g1261 17 12375759 12378803 PCT
Gso5g0575 5 6741490 6744843 Gso1g1738 1 54203014 54206554 PCT
Gso17g1259 17 12355975 12360481 Gso1g1738 1 54203014 54206554 PCT