Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0233 ATGCTTGGGGGTCTTCTCCATAGGGGTCATAAGATAAAAGGGACAGTGGTGTTGATGCGCAAGAATGTGTTGGACGTGAATAGCGTAACCAGCGTTGGGGGAATTATTGGTCAAGGTCTCGACTTAGTTGGCTCAACACTCGATACTCTTACTGCCTTCTTGGGCCGATCCGTGTCTCTCCAGCTTATTAGTGCTACCAAAGCTGATGCCAACGGAAAAGGGAAACTTGGAAAGGCTACCTTTTTGGAAGGTATCATTACTTCATTGCCAACTTTGGGAGCAGGCCAATCTGCATTCAAAATTAATTTTGAATGGGATGATGGGAGTGGAATTCCTGGAGCATTTTATATCAAGAATTTTATGCAAACTGAGTTTTTCCTTGTGAGTTTGACTCTTGAAGACATTCCAAACCATGGAAGCATCCACTTTGTTTGCAATTCGTGGATTTACAATGCCAAACTCTTCAAAAGTGACCGCATTTTCTTTGCCAACCAGACATATCTTCCAAGTGAGACACCAGCTCCACTAGTCAAATATAGAGAAGAAGAGTTGCATAATTTAAGAGGAGATGGAACTGGAGAACGCAAAGAGTGGGAAAGGATCTATGATTATGATGTCTACAATGATTTAGGTGATCCGGATAAAGGTGAAAATCATGCCCGTCCTGTTCTTGGAGGAAATGACACCTTTCCTTATCCTCGTAGGGGGAGAACTGGTAGAAAACCAACAAGGAAAGATCCTAATAGTGAGAGTAGGAGCAATGATGTTTATCTTCCAAGAGATGAGGCTTTTGGACACTTGAAGTCATCTGACTTTCTTACTTATGGACTAAAATCCGTATCTCAAAATGTTCTTCCATTATTGCAATCTGCTTTTGATTTGAATTTCACACCCCGTGAGTTTGATAGCTTTGATGAAGTTCATGGACTCTATTCAGGCGGAATTAAGCTGCCAACAGATATAATCAGCAAGATTAGTCCACTACCCGTGCTTAAGGAAATCTTCCGAACTGATGGTGAACAGGCCCTTAAGTTTCCTCCTCCTAAAGTAATTCAAGTGAGTAAGTCTGCATGGATGACTGATGAAGAATTTGCAAGAGAAATGCTTGCTGGTGTAAATCCAAACTTGATTCGTTGTCTTAAGGATTTCCCTCCACGAAGCAAGCTAGATAGCCAAGTCTATGGTGATCATACTAGTCAAATAACCAAAGAACACCTAGAGCCCAACTTAGAAGGGCTCACTGTAGATGAGGCAATTCAAAACAAGAGATTGTTCCTACTAGATCATCATGACCCAATCATGCCATATTTGAGGCGAATAAATGCAACCTCCACAAAGGCTTATGCTACCAGAACCATCCTTTTCCTGAAAAATGACGGAACTTTAAGGCCACTTGCCATAGAGTTGAGTTTGCCACATCCTCAGGGAGATCAATCTGGTGCTTTTAGTCAAGTTTTTCTGCCTGCAGATGAAGGTGTTGAAAGTTCTATTTGGCTGCTAGCAAAGGCTTATGTAGTTGTGAATGACTCGTGCTATCATCAACTTGTCAGCCATTGGTTAAACACTCATGCAGTTGTTGAGCCATTCATCATAGCAACAAACAGGCATCTCAGTGTTGTTCACCCTATTTATAAACTCCTTCACCCTCACTATCGTGACACCATGAACATAAATGGCCTTGCTCGGTTATCACTGGTCAACGACGGTGGCGTTATAGAACAAACATTTTTGTGGGGAAGGTATTCTGTGGAAATGTCTGCTGTAGTTTACAAGGATTGGGTTTTTACAGATCAAGCATTGCCTGCTGATCTTATAAAAAGAGGAATGGCAATTGAGGATCCATCGTGCCCTCATGGCATTCGCCTTGTGATAGAGGACTACCCTTATGCTGTTGATGGACTTGAGATATGGGATGCTATCAAGACATGGGTCCATGAATACGTTTTCTTGTACTACAAATCAGATGACACACTTAGAGAAGATCCTGAACTCCAAGCCTGCTGGAAAGAACTCGTAGAGGTGGGTCATGGAGACAAGAAAAATGAGCCATGGTGGCCTAAGATGCAAACTCGTGAAGAGCTAGTTGAATCTTGCGCTATCATCATATGGACTGCTTCAGCACTTCATGCAGCTGTTAATTTTGGACAGTATCCCTATGGAGGTTTAATCTTAAACCGTCCAACTCTTAGTAGGCGATTCATGCCTGAGAAAGGTTCTGCTGAGTATGAGGAGCTGAGGAAGAATCCCCAGAAGGCTTACTTGAAGACTATTACACCAAAGTTTCAGACCCTTATTGACCTTTCTGTTATAGAAATCTTGTCAAGGCATGCATCTGATGAGGTGTACCTTGGGGAGAGGGACAATCCAAATTGGACATCTGATACAAGAGCATTAGAGGCTTTTAAAAGGTTTGGAAATAAACTGGCACAAATTGAGAATAAACTCTCAGAGAGAAACAACGATGAGAAACTGAGAAACCGTTGTGGACCAGTTCAAATGCCTTATACTCTGCTTTTGCCTTCTAGTAAGGAAGGATTAACTTTCAGAGGAATTCCCAACAGTATCTCTATCTGA 2574 0.42 MLGGLLHRGHKIKGTVVLMRKNVLDVNSVTSVGGIIGQGLDLVGSTLDTLTAFLGRSVSLQLISATKADANGKGKLGKATFLEGIITSLPTLGAGQSAFKINFEWDDGSGIPGAFYIKNFMQTEFFLVSLTLEDIPNHGSIHFVCNSWIYNAKLFKSDRIFFANQTYLPSETPAPLVKYREEELHNLRGDGTGERKEWERIYDYDVYNDLGDPDKGENHARPVLGGNDTFPYPRRGRTGRKPTRKDPNSESRSNDVYLPRDEAFGHLKSSDFLTYGLKSVSQNVLPLLQSAFDLNFTPREFDSFDEVHGLYSGGIKLPTDIISKISPLPVLKEIFRTDGEQALKFPPPKVIQVSKSAWMTDEEFAREMLAGVNPNLIRCLKDFPPRSKLDSQVYGDHTSQITKEHLEPNLEGLTVDEAIQNKRLFLLDHHDPIMPYLRRINATSTKAYATRTILFLKNDGTLRPLAIELSLPHPQGDQSGAFSQVFLPADEGVESSIWLLAKAYVVVNDSCYHQLVSHWLNTHAVVEPFIIATNRHLSVVHPIYKLLHPHYRDTMNINGLARLSLVNDGGVIEQTFLWGRYSVEMSAVVYKDWVFTDQALPADLIKRGMAIEDPSCPHGIRLVIEDYPYAVDGLEIWDAIKTWVHEYVFLYYKSDDTLREDPELQACWKELVEVGHGDKKNEPWWPKMQTREELVESCAIIIWTASALHAAVNFGQYPYGGLILNRPTLSRRFMPEKGSAEYEELRKNPQKAYLKTITPKFQTLIDLSVIEILSRHASDEVYLGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPSSKEGLTFRGIPNSISI* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0233 857 CDD PLAT_LH2 10 164 IPR042057 -
Gso15g0233 857 Pfam Lipoxygenase 176 840 IPR013819 GO:0016702|GO:0046872
Gso15g0233 857 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 166 857 IPR013819 GO:0016702|GO:0046872
Gso15g0233 857 Gene3D PLAT/LH2 domain 1 167 - -
Gso15g0233 857 Gene3D - 357 490 - -
Gso15g0233 857 ProSitePatterns Lipoxygenases iron-binding region signature 1. 513 527 IPR020833 GO:0016702|GO:0046872
Gso15g0233 857 Pfam PLAT/LH2 domain 65 162 IPR001024 GO:0005515
Gso15g0233 857 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE-3 1 857 - -
Gso15g0233 857 PANTHER LIPOXYGENASE 1 857 IPR000907 GO:0016702|GO:0046872
Gso15g0233 857 Gene3D - 268 356 IPR027433 -
Gso15g0233 857 MobiDBLite consensus disorder prediction 213 257 - -
Gso15g0233 857 ProSiteProfiles PLAT domain profile. 38 163 IPR001024 GO:0005515
Gso15g0233 857 Gene3D - 491 856 - -
Gso15g0233 857 MobiDBLite consensus disorder prediction 242 257 - -
Gso15g0233 857 SMART LH2_4 10 164 IPR001024 GO:0005515
Gso15g0233 857 ProSitePatterns Lipoxygenases iron-binding region signature 2. 540 550 IPR020834 GO:0016702|GO:0046872
Gso15g0233 857 PRINTS Lipoxygenase signature 495 512 IPR013819 GO:0016702|GO:0046872
Gso15g0233 857 PRINTS Lipoxygenase signature 513 530 IPR013819 GO:0016702|GO:0046872
Gso15g0233 857 PRINTS Lipoxygenase signature 533 553 IPR013819 GO:0016702|GO:0046872
Gso15g0233 857 PRINTS Plant lipoxygenase signature 133 151 IPR001246 GO:0016491
Gso15g0233 857 PRINTS Plant lipoxygenase signature 159 180 IPR001246 GO:0016491
Gso15g0233 857 PRINTS Plant lipoxygenase signature 198 214 IPR001246 GO:0016491
Gso15g0233 857 PRINTS Plant lipoxygenase signature 231 250 IPR001246 GO:0016491
Gso15g0233 857 PRINTS Plant lipoxygenase signature 298 319 IPR001246 GO:0016491
Gso15g0233 857 PRINTS Plant lipoxygenase signature 343 359 IPR001246 GO:0016491
Gso15g0233 857 PRINTS Plant lipoxygenase signature 382 401 IPR001246 GO:0016491
Gso15g0233 857 PRINTS Plant lipoxygenase signature 448 472 IPR001246 GO:0016491
Gso15g0233 857 PRINTS Plant lipoxygenase signature 770 784 IPR001246 GO:0016491
Gso15g0233 857 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 9 167 IPR036392 GO:0005515
Gso15g0233 857 SUPERFAMILY Lipoxigenase 168 857 IPR036226 -
Gso15g0233 857 Gene3D - 168 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0233 Gso-Chr15 2131563 2135923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0233 3 857 Acyl Lipid Metabolism Gene Families AT1G55020 60.784 0.0 1087
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0233 K15718 - gmx:547869 1734.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0233 15 2131563 2135923 Gso11g3573 11 51445908 51452195 GST
Gso15g0233 15 2131563 2135923 Gso7g0057 7 504723 515607 PCT
Gso15g0233 15 2131563 2135923 Gso8g1571 8 15326626 15331261 PCT
Gso8g1568 8 15264948 15270531 Gso15g0233 15 2131563 2135923 PCT