Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0057 ATGACAGGTGGGATCTTTGGAAGGAAGGGGCAAAAGATAAAGGGGACAGTGGTGTTGATGCCAAAGAATGTGTTGGACTTCAACGCCATAACCTCCGTCGGAAAAGGCAGTGCTAAGGACACCGCCACCGATTTCTTGGGCAAAGGCTTGGACGCATTAGGTCATGCAGTTGATGCTCTCACTGCCTTCGCTGGCCATAGCATCTCCTTGCAGCTTATCAGTGCTACTCAGACTGATGGTAGTGGAAAAGGAAAAGTTGGAAACGAAGCCTATTTGGAAAAACATCTTCCGACCTTGCCAACGTTGGGAGCAAGGCAGGAAGCATTCGATATTAACTTTGAATGGGATGCTAGTTTTGGAATTCCAGGAGCATTTTACATCAAAAACTTTATGACTGATGAGTTTTTCCTCGTCAGTGTTAAACTCGAGGACATTCCAAACCATGGAACCATTAACTTCGTTTGTAACTCATGGGTTTATAACTTCAAAAGTTACAAAAAGAATCGCATTTTCTTTGTCAATGATACATATCTTCCGAGTGCTACACCAGGTCCACTAGTTAAGTACAGACAAGAAGAATTGGAGGTTTTAAGAGGAGATGGAACAGGGAAGCGCAGAGACTTTGACAGAATCTATGATTATGATATCTATAATGATTTGGGCAATCCAGATGGTGGTGATCCTCGCCCAATCATTGGAGGCTCTAGCAACTATCCTTACCCTCGCAGGGTTAGAACCGGTAGAGAAAAGACCAGGAAAGATCCCAACAGTGAGAAACCAGGCGAGATATATGTTCCAAGAGATGAAAACTTCGGTCACTTGAAGTCATCTGATTTCCTTACATATGGAATCAAATCCTTATCTCAGAACGTGATACCTTTGTTCAAATCTATAATATTTGACTTAAGGGTCACATCGAGTGAGTTCGATAGCTTCGACGAAGTGCGTGGTCTCTTTGAAGGTGGAATCAAGCTGCCAACAAATATACTGAGCCAAATTAGCCCCTTACCAGTCCTCAAGGAAATCTTCCGCACTGATGGTGAAAATACCCTTCAATTTCCACCACCTCATGTAATCAGAGTTAGTAAATCTGGATGGATGACTGATGATGAGTTTGCAAGAGAGATGATTGCTGGTGTAAATCCAAATGTAATTCGTCGTCTTCAAGAGTTCCCACCAAAAAGCACTCTTGATCCCGCAACCTATGGTGATCAAACTAGTACCATAACAAAACAACAGTTGGAGATTAACTTGGGTGGGGTCACAGTAGAAGAGGCAATTAGTGCTCACAGATTATTCATATTAGATTACCATGATGCATTCTTCCCGTATTTGACGAAGATAAACAGCCTACCTATTGCAAAAGCTTATGCCACAAGGACAATCCTGTTCTTGAAAGACGATGGATCTTTAAAGCCACTTGCTATCGAATTAAGCAAGCCTGCAACAGTGAGTAAAGTGGTGTTGCCTGCAACAGAAGGTGTTGAGAGTACAATTTGGTTGTTGGCCAAGGCTCATGTCATTGTGAATGACTCTGGTTATCATCAGCTCATAAGCCATTGGTTAAATACTCATGCAGTGATGGAGCCATTTGCCATAGCAACAAACAGGCATCTCAGTGTGCTTCACCCCATTTATAAACTTCTTTATCCTCACTACAAGGACACAATAAATATCAATGGCCTTGCTAGGCAGTCCCTGATTAACGCAGGTGGCATTATTGAGCAAACATTTTTGCCTGGAAAGTACTCCATTGAAATGTCATCAGTTGTTTACAAGAATTGGGTTTTCACTGACCAAGCATTACCAGCTGATCTTGTCAAGAGAGGATTGGCAGTTGAGGATCCCTCTGCCCCACATGGTCTTCGCCTTGTGATAGAGGACTACCCTTATGCTGTTGATGGACTTGAAATATGGGATGCTATTAAGACATGGGTCCATGAGTATGTCTCTGTGTATTACCCAACAAATGCAGCAATTCAACAAGACACTGAACTTCAAGCATGGTGGAAGGAAGTTGTGGAGAAGGGTCATGGTGACTTAAAAGATAAGCCTTGGTGGCCTAAACTGCAGACTGTGGAGGATCTCATTCAATCCTGCTCTATTATCATATGGACAGCTTCGGCTCTCCATGCAGCTGTTAATTTTGGGCAATACCCTTATGGAGGTTATATCGTGAACCGTCCAACTCTAGCCAGAAGGTTTATCCCAGAAGAAGGAACCAAAGAATATGATGAGATGGTGAAGGATCCTCAAAAGGCATATCTGAGAACAATCACACCCAAGTTCGAGACCCTTATTGACATTTCAGTGATAGAGATATTGTCAAGGCATGCTTCTGATGAGGTCTACCTTGGCCAAAGGGATAATCCAAATTGGACTACGGATTCAAAGGCATTGGAAGCTTTCAAAAAGTTTGGAAACAAACTGGCAGAAATTGAGGGAAAAATCACACAGAGGAACAATGATCCAAGTCTGAAAAGCCGACATGGGCCAGTTCAGCTTCCATACACATTGCTCCATCGTTCAAGTGAGGAAGGGATGAGTTTCAAAGGAATTCCCAACAGTATCTCCATCAAGTGTGGAGTACTGTTGATAGCAAAGATGTTTGGGATCTTCGACAAGGGGCAAAAGATAAAGGGGACAGTGGTGTTGATGCCAAAGAATGTGTTGGACTTCAACGCCATAACCTCCATCGGTAAAGGTGGTGTTATTGACACAGCCACCGGCATCTTAGGCCAAGGCGTCAGCTTAGTTGGTGGAGTAATTGATACTGCCACTTCCTTCTTAGGCCGTAATATCTCCATGCAATTGATCAGTGCTACTCAGACTGATGGCAGTGGAAATGGGAAAGTTGGAAAAGAAGTCTATTTGGAAAAACATCTTCCGACCTTGCCAACGTTGGGAGCAAGGCAGGATGCGTTCAGTATTTTCTTTGAATGGGATGCTAGTTTTGGAATTCCAGGAGCATTTTACATCAAAAACTTTATGACTGATGAGTTTTTCCTCGTCAGTGTTAAACTCGAGGACATTCCAAACCATGGAACCATTGAATTTGTTTGCAACTCATGGGTTTACAACTTCAGGAGTTACAAAAAGAATCGCATTTTCTTTGTCAATGATACATATCTTCCAAGTGCCACACCAGCTCCACTACTTAAGTACAGAAAAGAAGAATTGGAGGTTTTAAGAGGAGATGGAACAGGGAAGAGAAAGGACTTTGACAGAATCTATGATTATGATGTCTATAATGATTTGGGCAATCCAGATGGTGGTGATCCTCGCCCAATCCTTGGTGGGTCTAGCATCTATCCCTACCCTCGCAGGGTTAGAACAGGAAGAGAAAGGACCAGGACAGATCCCAACAGTGAGAAACCGGGCGAGGTTTATGTTCCAAGAGATGAAAATTTTGGTCACTTGAAGTCATCGGATTTCCTTACATACGGAATCAAATCCTTATCTCACGATGTGATACCTTTGTTCAAATCTGCAATTTTTCAATTAAGGGTCACATCGAGTGAGTTTGAAAGCTTCGAAGATGTGCGTAGTCTCTATGAGGGTGGAATTAAATTGCCAACAGATATACTGAGCCAAATTAGCCCCTTACCAGCCCTCAAGGAAATCTTCCGCACTGATGGTGAAAATGTTCTTCAATTTCCACCACCTCATGTAGCCAAAGTTAGTAAGTCTGGGTGGATGACTGATGAGGAATTTGCTAGAGAGGTGATTGCCGGTGTAAACCCAAATGTGATCCGTCGTCTTCAAGAATTCCCACCAAAGAGCACACTTGATCCCACACTCTATGGTGATCAAACCAGTACCATAACAAAAGAACAATTGGAGATTAACATGGGAGGGGTCACAGTAGAAGAGGCACTTAGTACTCAGAGATTATTCATATTAGATTACCAAGATGCATTCATCCCATATTTGACGAGGATAAACAGCCTACCTACTGCAAAAGCTTATGCCACAAGGACAATCCTGTTCTTGAAAGATGATGGTACTTTGAAGCCACTTGCTATTGAATTAAGCAAACCACATCCAGATGGAGATAATTTGGGTCCTGAGAGTATAGTGGTGTTGCCTGCAACTGAAGGTGTTGATAGTACAATTTGGCTATTGGCCAAGGCTCATGTTATTGTGAATGACTCTGGTTATCATCAGCTCGTGAGCCATTGGTTAAATACTCATGCAGTGATGGAACCATTTGCCATAGCAACCAATAGGCATCTCAGTGTGCTCCACCCTATTTATAAACTTCTTTATCCTCACTACCGCGACACCATAAATATCAATGGACTTGCTAGGCAGTCCCTGATTAATGCAGATGGCATTATAGAGAAATCATTTTTGCCCGGAAAGTACTCCATTGAGATGTCTTCATCCGTCTACAAGAATTGGGTTTTCACTGACCAAGCATTACCAGCTGATCTCGTCAAGAGAGGATTGGCAATTGAAGATCCCTCTGCACCCCATGGCCTTCGCCTTGTGATAGAGGACTACCCTTATGCTGTTGATGGACTTGAAATATGGGATGCTATTAAGACATGGGTTCATGAATATGTCTCCTTGTATTACCCAACAGATGCAGCAGTTCAACAAGATACTGAACTACAAGCATGGTGGAAGGAAGCTGTGGAGAAGGGTCATGGTGACTTAAAAGAAAAGCCTTGGTGGCCTAAAATGCAGACAACTGAAGATCTCATTCAATCATGCTCTATTATCGTTTGGACAGCTTCGGCTCTCCATGCTGCTGTTAATTTTGGACAATATCCTTATGGGGGCTTAATCCTGAACCGTCCAACTCTAGCCAGAAGGTTTATCCCAGCTGAAGGAACCCCAGAGTATGATGAGATGGTGAAGAATCCTCAAAAGGCTTATCTGAGAACAATCACACCCAAGTTTGAGACCCTTATTGATCTTTCAGTGATAGAGATATTGTCAAGGCATGCTTCTGATGAGATATACCTTGGAGAGAGGGAGACTCCAAATTGGACTACTGATAAGAAGGCATTAGAAGCTTTCAAAAGGTTTGGAAGCAAACTGACTGGAATTGAAGGAAAAATCAATGCAAGGAACAGTGATCCAAGTCTGAGAAACCGGACTGGGCCAGTTCAGCTGCCATACACTTTGCTCCATCGTTCAAGTGAGGAAGGGTTGACTTTCAAAGGAATTCCCAACAGTATCTCTATCTAA 5199 0.428 MTGGIFGRKGQKIKGTVVLMPKNVLDFNAITSVGKGSAKDTATDFLGKGLDALGHAVDALTAFAGHSISLQLISATQTDGSGKGKVGNEAYLEKHLPTLPTLGARQEAFDINFEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTINFVCNSWVYNFKSYKKNRIFFVNDTYLPSATPGPLVKYRQEELEVLRGDGTGKRRDFDRIYDYDIYNDLGNPDGGDPRPIIGGSSNYPYPRRVRTGREKTRKDPNSEKPGEIYVPRDENFGHLKSSDFLTYGIKSLSQNVIPLFKSIIFDLRVTSSEFDSFDEVRGLFEGGIKLPTNILSQISPLPVLKEIFRTDGENTLQFPPPHVIRVSKSGWMTDDEFAREMIAGVNPNVIRRLQEFPPKSTLDPATYGDQTSTITKQQLEINLGGVTVEEAISAHRLFILDYHDAFFPYLTKINSLPIAKAYATRTILFLKDDGSLKPLAIELSKPATVSKVVLPATEGVESTIWLLAKAHVIVNDSGYHQLISHWLNTHAVMEPFAIATNRHLSVLHPIYKLLYPHYKDTININGLARQSLINAGGIIEQTFLPGKYSIEMSSVVYKNWVFTDQALPADLVKRGLAVEDPSAPHGLRLVIEDYPYAVDGLEIWDAIKTWVHEYVSVYYPTNAAIQQDTELQAWWKEVVEKGHGDLKDKPWWPKLQTVEDLIQSCSIIIWTASALHAAVNFGQYPYGGYIVNRPTLARRFIPEEGTKEYDEMVKDPQKAYLRTITPKFETLIDISVIEILSRHASDEVYLGQRDNPNWTTDSKALEAFKKFGNKLAEIEGKITQRNNDPSLKSRHGPVQLPYTLLHRSSEEGMSFKGIPNSISIKCGVLLIAKMFGIFDKGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNISMQLISATQTDGSGNGKVGKEVYLEKHLPTLPTLGARQDAFSIFFEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKNRIFFVNDTYLPSATPAPLLKYRKEELEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGGDPRPILGGSSIYPYPRRVRTGRERTRTDPNSEKPGEVYVPRDENFGHLKSSDFLTYGIKSLSHDVIPLFKSAIFQLRVTSSEFESFEDVRSLYEGGIKLPTDILSQISPLPALKEIFRTDGENVLQFPPPHVAKVSKSGWMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPTLYGDQTSTITKEQLEINMGGVTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKDDGTLKPLAIELSKPHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHWLNTHAVMEPFAIATNRHLSVLHPIYKLLYPHYRDTININGLARQSLINADGIIEKSFLPGKYSIEMSSSVYKNWVFTDQALPADLVKRGLAIEDPSAPHGLRLVIEDYPYAVDGLEIWDAIKTWVHEYVSLYYPTDAAVQQDTELQAWWKEAVEKGHGDLKEKPWWPKMQTTEDLIQSCSIIVWTASALHAAVNFGQYPYGGLILNRPTLARRFIPAEGTPEYDEMVKNPQKAYLRTITPKFETLIDLSVIEILSRHASDEIYLGERETPNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRSSEEGLTFKGIPNSISI* 1733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0057 1732 Gene3D - 178 274 - -
Gso7g0057 1732 Gene3D - 1044 1140 - -
Gso7g0057 1732 ProSitePatterns Lipoxygenases iron-binding region signature 2. 1415 1425 IPR020834 GO:0016702|GO:0046872
Gso7g0057 1732 ProSitePatterns Lipoxygenases iron-binding region signature 1. 1388 1402 IPR020833 GO:0016702|GO:0046872
Gso7g0057 1732 SUPERFAMILY Lipoxigenase 178 859 IPR036226 -
Gso7g0057 1732 Pfam PLAT/LH2 domain 945 1038 IPR001024 GO:0005515
Gso7g0057 1732 Pfam PLAT/LH2 domain 77 172 IPR001024 GO:0005515
Gso7g0057 1732 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 10 177 IPR036392 GO:0005515
Gso7g0057 1732 MobiDBLite consensus disorder prediction 1112 1132 - -
Gso7g0057 1732 Gene3D - 275 363 IPR027433 -
Gso7g0057 1732 Gene3D - 1141 1229 IPR027433 -
Gso7g0057 1732 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 176 859 IPR013819 GO:0016702|GO:0046872
Gso7g0057 1732 CDD PLAT_LH2 878 1040 IPR042057 -
Gso7g0057 1732 ProSitePatterns Lipoxygenases iron-binding region signature 2. 542 552 IPR020834 GO:0016702|GO:0046872
Gso7g0057 1732 ProSitePatterns Lipoxygenases iron-binding region signature 1. 515 529 IPR020833 GO:0016702|GO:0046872
Gso7g0057 1732 Pfam Lipoxygenase 1052 1714 IPR013819 GO:0016702|GO:0046872
Gso7g0057 1732 Pfam Lipoxygenase 186 841 IPR013819 GO:0016702|GO:0046872
Gso7g0057 1732 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 1042 1732 IPR013819 GO:0016702|GO:0046872
Gso7g0057 1732 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 876 1043 IPR036392 GO:0005515
Gso7g0057 1732 SMART LH2_4 11 174 IPR001024 GO:0005515
Gso7g0057 1732 SMART LH2_4 877 1040 IPR001024 GO:0005515
Gso7g0057 1732 Gene3D - 364 492 - -
Gso7g0057 1732 Gene3D - 1230 1365 - -
Gso7g0057 1732 ProSiteProfiles PLAT domain profile. 912 1039 IPR001024 GO:0005515
Gso7g0057 1732 ProSiteProfiles PLAT domain profile. 48 173 IPR001024 GO:0005515
Gso7g0057 1732 CDD PLAT_LH2 12 174 IPR042057 -
Gso7g0057 1732 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE 4 859 - -
Gso7g0057 1732 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE 869 1732 - -
Gso7g0057 1732 SUPERFAMILY Lipoxigenase 1044 1732 IPR036226 -
Gso7g0057 1732 MobiDBLite consensus disorder prediction 243 262 - -
Gso7g0057 1732 PRINTS Lipoxygenase signature 1370 1387 IPR013819 GO:0016702|GO:0046872
Gso7g0057 1732 PRINTS Lipoxygenase signature 1388 1405 IPR013819 GO:0016702|GO:0046872
Gso7g0057 1732 PRINTS Lipoxygenase signature 1408 1428 IPR013819 GO:0016702|GO:0046872
Gso7g0057 1732 MobiDBLite consensus disorder prediction 222 262 - -
Gso7g0057 1732 PANTHER LIPOXYGENASE 869 1732 IPR000907 GO:0016702|GO:0046872
Gso7g0057 1732 PANTHER LIPOXYGENASE 4 859 IPR000907 GO:0016702|GO:0046872
Gso7g0057 1732 PRINTS Plant lipoxygenase signature 1009 1027 IPR001246 GO:0016491
Gso7g0057 1732 PRINTS Plant lipoxygenase signature 1035 1056 IPR001246 GO:0016491
Gso7g0057 1732 PRINTS Plant lipoxygenase signature 1074 1090 IPR001246 GO:0016491
Gso7g0057 1732 PRINTS Plant lipoxygenase signature 1105 1124 IPR001246 GO:0016491
Gso7g0057 1732 PRINTS Plant lipoxygenase signature 1172 1193 IPR001246 GO:0016491
Gso7g0057 1732 PRINTS Plant lipoxygenase signature 1217 1233 IPR001246 GO:0016491
Gso7g0057 1732 PRINTS Plant lipoxygenase signature 1256 1275 IPR001246 GO:0016491
Gso7g0057 1732 PRINTS Plant lipoxygenase signature 1323 1347 IPR001246 GO:0016491
Gso7g0057 1732 PRINTS Plant lipoxygenase signature 1645 1659 IPR001246 GO:0016491
Gso7g0057 1732 Gene3D - 493 858 - -
Gso7g0057 1732 Gene3D - 1366 1731 - -
Gso7g0057 1732 Gene3D PLAT/LH2 domain 869 1043 - -
Gso7g0057 1732 Gene3D PLAT/LH2 domain 4 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0057 Gso-Chr7 504723 515607 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0057 1 859 Acyl Lipid Metabolism Gene Families AT1G55020 55.518 0.0 979
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0057 K15718 - gmx:547835 1729.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0057 7 504723 515607 Gso8g1571 8 15326626 15331261 GST
Gso15g0233 15 2131563 2135923 Gso7g0057 7 504723 515607 PCT
Gso11g3573 11 51445908 51452195 Gso7g0057 7 504723 515607 PCT
Gso7g0057 7 504723 515607 Gso11g3574 11 51469699 51475203 PCT