Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1063 ATGGAATTGATGGTGTGTGGAAAGCTTAGGGGGTGCCTTGTTCTTGTGTTCTTTGCTGCACTGTTGGTGGGTTTAGTGAATGGAATTGGTGTTAATTGGGGCACACAATTAACACACCCTTTGCCAGCATCCACTATAGTGAAAATGCTAAAGGACAATGGTATTCAGAAAGTTAAGCTTTTTGATGCTGACCCTGATATTCTTAATGCTCTTAAGAAGTCTGGGATTCAGGTGATGGTGGGTATACCAAATGACATGCTTTACACACTGGCTAACAATATGCAAGCAGCTGAAAAATGGGTTTCTAAGAATGTTTCAGCACATGTCTCATCTGGGGGAGTGGACATCAGGTATGTTGCAGTGGGAAATGAACCTTTCTTGTCAACTTACAATGGAACCTTTGAAGCCATAACACTTCCAGCTCTTCAAAACATCCAATCAGCTCTTGTGAAAGCTGGTTTAGGCAATCAGGTTAAGGTCACTGTTCCCCTAAACGCCGATGTGTATCAGAGCACACAAGTACCTTCTGATGGAGACTTCAGGCAAAACATCCATGATCTCATGGTGCAGATTGTTAAGTTCTTGAGCCAGAACAACGCTCCATTTACCGTGAACATCTATCCTTTCATCAGCCTCTATTCAGACTCCAATTTTCCTGTTGACTATGCCTTCTTCAATGGCTTTCAGTCTCCTATAAATGACAACGGAAGGATCTATGACAATGTCTTTGATGCCAACCATGATACTCTAGTGTGGGCACTGCAGAAGAATGGTTTCGGAAACATGCCTATAATTGTGGGAGAAGTTGGGTGGCCTACAGATGGAGACAGAAACGCAAACCTTCAATACGCGCAACGCTTCAACCAAGGCTTCATGTCGCGCTACATTGCCGGAAAAGGGACACCAATGAGGCCTGGTCCTATGGATGCTTACTTGTTTAGTCTCATAGATGAAGATTTCAAAAGCATTCAGCCGGGTAATTTTGAAAGACATTGGGGGTTGTTTTACTATGATGGACAACCCAAGTACATGCTTAACATAGGATCAAGAGCCAATGGCTTAGTAGCTGCTACTGGGGTGGCATATCTACCCAAAAAGTGGTGCATTTTGAAAACCTCAGCAAACCTCAATAGTGATCAAGTGGCACCAAGTGTGTCTTATGCTTGTCAAAATGCAGATTGCACAAGTCTTGGATATCAAACTTCATGTGGTGGTTTAGATGCTCGTGGTAATCTTTCTTATGCATTCAATAGTTACTTCCAAGTGAATGACCAGATTGACAGTGCATGCAAATTCCCCGGTCTTTCTGTTGTCACTGACAAAGATCCTTCAACTGGAGATTGCAAGTTCAAAATCATGATTCAGACAGATTCTGCTGGTCTACATGGGAATGGGAGAATTTGGTCTCTCAGAATAGTACTCTTTGTACTTTTGTTTTTCACTCTTATGTGA 1452 0.4249 MELMVCGKLRGCLVLVFFAALLVGLVNGIGVNWGTQLTHPLPASTIVKMLKDNGIQKVKLFDADPDILNALKKSGIQVMVGIPNDMLYTLANNMQAAEKWVSKNVSAHVSSGGVDIRYVAVGNEPFLSTYNGTFEAITLPALQNIQSALVKAGLGNQVKVTVPLNADVYQSTQVPSDGDFRQNIHDLMVQIVKFLSQNNAPFTVNIYPFISLYSDSNFPVDYAFFNGFQSPINDNGRIYDNVFDANHDTLVWALQKNGFGNMPIIVGEVGWPTDGDRNANLQYAQRFNQGFMSRYIAGKGTPMRPGPMDAYLFSLIDEDFKSIQPGNFERHWGLFYYDGQPKYMLNIGSRANGLVAATGVAYLPKKWCILKTSANLNSDQVAPSVSYACQNADCTSLGYQTSCGGLDARGNLSYAFNSYFQVNDQIDSACKFPGLSVVTDKDPSTGDCKFKIMIQTDSAGLHGNGRIWSLRIVLFVLLFFTLM* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1063 483 ProSitePatterns Glycosyl hydrolases family 17 signature. 262 275 IPR000490 GO:0004553|GO:0005975
Gso14g1063 483 Gene3D Glycosidases 27 353 - -
Gso14g1063 483 Coils Coil 483 483 - -
Gso14g1063 483 SMART X8_cls 366 450 IPR012946 -
Gso14g1063 483 Gene3D - 364 460 - -
Gso14g1063 483 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 16 460 IPR044965 GO:0004553|GO:0005975
Gso14g1063 483 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 5 16 460 - -
Gso14g1063 483 SUPERFAMILY (Trans)glycosidases 29 346 IPR017853 -
Gso14g1063 483 Pfam X8 domain 366 435 IPR012946 -
Gso14g1063 483 Pfam Glycosyl hydrolases family 17 29 346 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1063 Gso-Chr14 18455068 18458620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g1063 13 459 Glycoside Hydrolase AT4G31140 71.652 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g1063 K19893 - gmx:100790297 979.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1063 14 18455068 18458620 Gso17g1715 17 32422522 32428420 GST
Gso14g1063 14 18455068 18458620 Gso6g1243 6 12080194 12082800 PCT
Gso4g0629 4 6127764 6132107 Gso14g1063 14 18455068 18458620 PCT
Gso6g0632 6 5860427 5865017 Gso14g1063 14 18455068 18458620 PCT