Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0632 ATGATGGGGGGTGGGAAGTTTAGTAGTTTTTTTGTTGTTTTTGTGTTGTTGGTGGGGTCAGGGAGTGGGATTGGTGTGAATTGGGGGACACAGTCAACACACCCTTTGTCACCGTCGAAGGTGGTGAAGATGCTGAAGGACAATGGCATTCAGAAGGTGAAGCTTTTTGATGCTGATGCTGGTATCTTGGATGCTCTCAAGAAGTCCGGAATACAGGTCATGGTTGGGATTCCAAATGACATGCTTTATACGCTGGCTAACAGTGTGGAAGCTGCTGAAAAATGGGTTTCCAAGAATGTCTCAAAACATGTCTCTTCTGGAGGAGTGGACATCAGGTACGTTGCAGTGGGGAATGAACCATTCTTGTCAACCTACAACGGTTCCTTCGAAGCCACAACTCTTCCAGCTCTCCAAAACATCCAGGCAGCTCTCACAAAATCCGGTTTGAGCAAACGTGTCAAAGTCACTGTCCCCTTAAATGCCGATGTATACCAAAGCTCATCCGAAAAGCCATCGGATGGCGGTTTCAGACCTGACATCAACAATGTGATGCTGCAGATTGTCAAGTTCCTTAACAACAACGGAGCTCCCTTCACAGTGAACATCTATCCTTTCATCAGCCTCTATGCAGACCCCAATTTCCCTGTTGACTACGCCTTCTTTAACGGCTACCAGCCCGCCATAAACGACAACGGAAGAAACTATGACAACGTGTTTGATGCCAACCATGACACTCTAGTATGGGCACTGCAGAAGAATGGCTTCGGAAACCTGCCTATAATTGTGGGGGAAATAGGGTGGCCAACAGACGGGGACCGAAATGCAAACCTTCAATATGCACAACGTTTTAACCAAGGTTTCATGTCACGTTACATGTCTGGAAAGGGTACCCCAATGAGGCCTGGTCCTATAGATGCTTATTTGTTTAGTCTCATAGATGAAGATGCCAAAAGCATTCAGCCAGGTAACTTTGAGCGTCATTGGGGCATGTTTTACTTCGATGCACAACCCAAATACCAACTTAACCTTGGGTCAGCACGAGGTAACGGGCTAGTAGGTGCTAGTGGTGTTGATCATTTGGCTAAAAAGTGGTGTGTTTTGAAACCCTCAGCAAACCTTAATGATGACCAACTTGCACCTAGTGTGGCCTATGCTTGTCAAAATGCTGATTGCACTAGTCTTGGGTATGGAACTTCTTGTGGCAATTTAGATGTGCATGGTAACATTTCTTATGCTTTTAATAGCTACTATCAGATAAATGACCAGATGGATAGTGCATGCAAATTCCCCAGCCTTTCCATGATCACTGACAAGGACCCTTCTGTAGGAGATTGCAAGTTCAGAATCATGATCCAGACAGATTCTGCGGAGCTACATGGAAAAGTTGGATATCTAACAACAGTGCTATGTTTTTTTGTACTTTTGCTATTCTGTAATCCTTGGTTTTGA 1449 0.4493 MMGGGKFSSFFVVFVLLVGSGSGIGVNWGTQSTHPLSPSKVVKMLKDNGIQKVKLFDADAGILDALKKSGIQVMVGIPNDMLYTLANSVEAAEKWVSKNVSKHVSSGGVDIRYVAVGNEPFLSTYNGSFEATTLPALQNIQAALTKSGLSKRVKVTVPLNADVYQSSSEKPSDGGFRPDINNVMLQIVKFLNNNGAPFTVNIYPFISLYADPNFPVDYAFFNGYQPAINDNGRNYDNVFDANHDTLVWALQKNGFGNLPIIVGEIGWPTDGDRNANLQYAQRFNQGFMSRYMSGKGTPMRPGPIDAYLFSLIDEDAKSIQPGNFERHWGMFYFDAQPKYQLNLGSARGNGLVGASGVDHLAKKWCVLKPSANLNDDQLAPSVAYACQNADCTSLGYGTSCGNLDVHGNISYAFNSYYQINDQMDSACKFPSLSMITDKDPSVGDCKFRIMIQTDSAELHGKVGYLTTVLCFFVLLLFCNPWF* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0632 482 Pfam Glycosyl hydrolases family 17 24 342 IPR000490 GO:0004553|GO:0005975
Gso6g0632 482 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 5 11 457 - -
Gso6g0632 482 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
Gso6g0632 482 Gene3D Glycosidases 23 349 - -
Gso6g0632 482 Gene3D - 359 457 - -
Gso6g0632 482 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 11 457 IPR044965 GO:0004553|GO:0005975
Gso6g0632 482 SMART X8_cls 363 447 IPR012946 -
Gso6g0632 482 Pfam X8 domain 363 431 IPR012946 -
Gso6g0632 482 SUPERFAMILY (Trans)glycosidases 24 342 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0632 Gso-Chr6 5860427 5865017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0632 1 478 Glycoside Hydrolase AT4G31140 67.775 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0632 K19893 - gmx:100814719 961.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0629 4 6127764 6132107 Gso6g0632 6 5860427 5865017 GST
Gso6g0632 6 5860427 5865017 Gso14g1063 14 18455068 18458620 PCT
Gso6g0632 6 5860427 5865017 Gso17g1715 17 32422522 32428420 PCT