Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0629 ATGGAGTTGATGGGGGGTGGAAAATTTAGTAGGTGTTTTGTTGTTGTTGTTGTTGGTGTGTTGTTCTTAGTGGGGTCAGTGAGTGGGATTGGTGTTAATTGGGGGACACAGTCAACACACCCTTTGTCACCGTCGAAGGTGGTGAAGATGCTGAAGGACAATGGCATTCAGAAGGTGAAGCTTTTTGATGCTGATGCTGGTATCTTGGATGCTCTCAAGAAGTCTGGGATACAGGTCATGGTGGGGATTCCGAATGACATGCTTTATACTCTGGCTAACAGTGTGGAAGCGGCTGAAAAATGGGTTTCCAAGAATATCTCCAAACATGTCTCTTCTGGAGGAGTGGACATCAGGTACGTTGCAGTGGGGAATGAACCATTCTTGTCAACATACAACGGTTCCTTCGAAGCCACAACTCTTCCAGCTCTCCAAAACATCCAGGCAGCTCTCACAAGATCTGGTTTGAGCAACCGTGTCAAAGTCACCGTCCCCTTAAATGCCGACGTATACCAAAGCTCATCCGAAAAGCCATCCGACGGCGGTTTCAGACCCGACATCAACAATGTCATGCTGCAGATTGTCAAGTTCTTGAATGACAACGGCGCTCCGTTCACAGTGAACATCTATCCTTTCATCAGCCTCTACGCAGACCCCAATTTCCCCGTTGACTATGCCTTCTTTAACGGCTACCAGCCCACCATAAACGACAACGGAAGAGCCTACGACAATGTGTTTGATGCCAACCATGACACTCTAGTATGGGCACTGCAGAAGAATGGCTTTGGAAACTTACCTATAATTGTGGGGGAAATTGGGTGGCCAACAGATGGGGACAGAAATGCAAACCTTCAATATGCACAACGTTTTAACCAAGGTTTCATGTCACGTTACATGTCTGGAAAAGGTACCCCAATGAGGCCTGGTCCTATAGATGCTTATTTGTTTAGTCTCATAGATGAAGATGCCAAAAGCATTCAGCCAGGTAACTTTGAGCGTCATTGGGGCATGTTTTACTTTGATGGCCAACCCAAATACCAACTTAACCTTGGGTCAGCACGAGGTAATGGGTTAGTAGGTGCTAGTGGCGTTGATCATTTGGCTAAAAAGTGGTGCGTTTTGAAACCCTCAGCAAACCTTAATGATGACCAACTTGCACCTAGTGTGGCCTATGCTTGTCAAAATGCTGATTGCACTAGTCTTGGGTATGGAACTTCGTGTGGCAATTTAGATGTTCATGGTAACATTTCTTATGCGTTTAATAGCTACTATCAGATAAATGACCAGATGGATAGTGCATGCAAATTCCCCGGCCTTTCCATGATCACTGACAAGGATCCTTCTGTTGGAGATTGCAAGTTCAGAATCATGATCCAGACAGATTCTGCGGAGCCACATGGAAAAGTTGGATATCTAACAACAGTGCTATGTTTTTTTGTTCTTTTGCTATTCTGTAATCTTTGGTTTTGA 1467 0.4506 MELMGGGKFSRCFVVVVVGVLFLVGSVSGIGVNWGTQSTHPLSPSKVVKMLKDNGIQKVKLFDADAGILDALKKSGIQVMVGIPNDMLYTLANSVEAAEKWVSKNISKHVSSGGVDIRYVAVGNEPFLSTYNGSFEATTLPALQNIQAALTRSGLSNRVKVTVPLNADVYQSSSEKPSDGGFRPDINNVMLQIVKFLNDNGAPFTVNIYPFISLYADPNFPVDYAFFNGYQPTINDNGRAYDNVFDANHDTLVWALQKNGFGNLPIIVGEIGWPTDGDRNANLQYAQRFNQGFMSRYMSGKGTPMRPGPIDAYLFSLIDEDAKSIQPGNFERHWGMFYFDGQPKYQLNLGSARGNGLVGASGVDHLAKKWCVLKPSANLNDDQLAPSVAYACQNADCTSLGYGTSCGNLDVHGNISYAFNSYYQINDQMDSACKFPGLSMITDKDPSVGDCKFRIMIQTDSAEPHGKVGYLTTVLCFFVLLLFCNLWF* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0629 488 SUPERFAMILY (Trans)glycosidases 30 348 IPR017853 -
Gso4g0629 488 SMART X8_cls 369 453 IPR012946 -
Gso4g0629 488 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 19 463 IPR044965 GO:0004553|GO:0005975
Gso4g0629 488 Pfam Glycosyl hydrolases family 17 30 348 IPR000490 GO:0004553|GO:0005975
Gso4g0629 488 ProSitePatterns Glycosyl hydrolases family 17 signature. 264 277 IPR000490 GO:0004553|GO:0005975
Gso4g0629 488 Gene3D - 365 463 - -
Gso4g0629 488 Gene3D Glycosidases 29 355 - -
Gso4g0629 488 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 5 19 463 - -
Gso4g0629 488 Pfam X8 domain 369 439 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0629 Gso-Chr4 6127764 6132107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0629 7 484 Glycoside Hydrolase AT4G31140 67.992 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0629 K19893 - gmx:100796552 952.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0629 4 6127764 6132107 Gso6g0632 6 5860427 5865017 GST
Gso4g0629 4 6127764 6132107 Gso14g1063 14 18455068 18458620 PCT
Gso4g0629 4 6127764 6132107 Gso17g1715 17 32422522 32428420 PCT