Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0160 ATGATGGAAAACGGTGGCAAACAGACATTTGAAGTCTCCAATGACACGCTTCAACGAGTAGGTTCCAAGAGCTTTGATGATGATGGCCGTCTCAAAAGAACTGGAACTATTTGGACTGCAAGTGCCCACATAATAACAGCTGTTATTGGTTCTGGGGTGCTATCTTTGGCTTGGGCTATTGCTCAGCTAGGTTGGATTGCTGGTCCTGTGGTGATGATTCTATTCTCTATTGTGACTTATTATACCTCAACTCTTCTAGCTACTTGTTACCGTTCTGGTGACCAACTCAGTGGCAAGAGAAACTACACTTACACACAAGCTGTTAGATCCTACCTTGGCGGTTTTTCGGTCAAGTTTTGTGGGTGGGTTCAGTATGCGAACCTTTTTGGAGTGGCAATTGGGTACACCATAGCAGCTTCCATAAGCATGATGGCAATCAAAAGGTCTAATTGTTATCATAGTAGCGGGGGGAAAAATCCATGCAAAATGAACAGCAATTGGTACATGATTTCATATGGTGTTTCGGAAATTATCTTCTCCCAAATTCCAGATTTCCATGAGTTGTGGTGGCTCTCTATTGTAGCTGCTGTCATGTCCTTCACATACTCATTCATTGGACTTGGCCTTGGTATTGGTAAAGTTATAGGAAACGGAAGAATTAAAGGAAGCCTAACTGGTGTAACTATTGGGACTGTGACAGAATCCCAAAAAATTTGGAGAACTTTCCAAGCGCTTGGAAACATAGCCTTTGCTTACTCCTACTCAATGATCCTTATTGAAATTCAGGACACAATCAAATCCCCTCCAGCAGAGTCAGAGACAATGTCCAAGGCTACTTTAATAAGTGTTTTGGTCACAACCGTTTTCTATATGCTATGTGGTTGCTTTGGCTATGCTTCTTTTGGAGATGCAAGTCCGGGAAACCTTCTCACTGGCTTTGGCTTCTATAACCCATTTTGGCTCATTGACATAGCCAATGCTGGCATTGTTATCCACCTTGTTGGTGCATACCAAGTTTACTGCCAACCCCTCTTCTCATTCGTCGAATCAAATGCGGCAGAAAGGTTCCCTAATAGTGATTTTATGAGCAGAGAGTTTGAAGTACCAATCCCTGGTTGCAAACCCTACAAGCTCAACCTCTTCAGGTTGGTTTGGAGGACACTTTTTGTGATTTTGTCAACTGTGATAGCCATGCTCCTACCATTCTTCAATGACATTGTAGGGCTTATTGGAGCCATTGGATTTTGGCCCCTCACTGTGTATTTACCAGTGGAGATGTATATAACTCAAACTAAGATACCAAAGTGGGGCATAAAATGGATAGGCCTACAAATGCTTAGTGTTGCATGCTTTGTAATTACTATATTAGCTGCAGCAGGTTCCATTGCTGGGGTTATTGATGATCTTAAAGTTTACAAGCCATTTGTTACCAGCTACTAA 1440 0.4222 MMENGGKQTFEVSNDTLQRVGSKSFDDDGRLKRTGTIWTASAHIITAVIGSGVLSLAWAIAQLGWIAGPVVMILFSIVTYYTSTLLATCYRSGDQLSGKRNYTYTQAVRSYLGGFSVKFCGWVQYANLFGVAIGYTIAASISMMAIKRSNCYHSSGGKNPCKMNSNWYMISYGVSEIIFSQIPDFHELWWLSIVAAVMSFTYSFIGLGLGIGKVIGNGRIKGSLTGVTIGTVTESQKIWRTFQALGNIAFAYSYSMILIEIQDTIKSPPAESETMSKATLISVLVTTVFYMLCGCFGYASFGDASPGNLLTGFGFYNPFWLIDIANAGIVIHLVGAYQVYCQPLFSFVESNAAERFPNSDFMSREFEVPIPGCKPYKLNLFRLVWRTLFVILSTVIAMLLPFFNDIVGLIGAIGFWPLTVYLPVEMYITQTKIPKWGIKWIGLQMLSVACFVITILAAAGSIAGVIDDLKVYKPFVTSY* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0160 479 PANTHER AMINO ACID CARRIER 6 473 - -
Gso13g0160 479 PANTHER OS05G0424000 PROTEIN-RELATED 6 473 - -
Gso13g0160 479 Pfam Transmembrane amino acid transporter protein 33 466 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0160 Gso-Chr13 10202345 10207211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0160 8 479 Organic Solute Cotransporters AT5G09220 71.579 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0160 K24917 - gmx:100775662 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1212 14 28580652 28585261 Gso13g0160 13 10202345 10207211 GST
Gso13g0160 13 10202345 10207211 Gso4g1762 4 47737829 47744690 PCT
Gso13g0160 13 10202345 10207211 Gso6g0989 6 9538315 9542505 PCT
Gso4g1761 4 47726936 47733998 Gso13g0160 13 10202345 10207211 PCT
Gso6g1319 6 12924925 12931603 Gso13g0160 13 10202345 10207211 PCT