Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1762 ATGGTTGAAAAATCTTCCAGAACCAACCTTGGCCACCATCAAGATTTTGGCATGGAGGCTTACTCCATAGATGGTGTTTCTTCACAAAGTGAGTCCAAATTCTACGATGATGATGGTCATGTTAAACGAACAGGGAACGTTTGGACTACAAGCTCGCACATAATAACAGCAGTGGTGGGTTCTGGGGTGCTGTCTTTGGCATGGGCCATGGCTCAAATGGGTTGGGTTGCTGGGCCTGTAGTTATGATCTTCTTCAGTGCTGTTACGTTGTATACGACGTCGCTTCTGGCTGATTGTTATCGGTGCGGTGACCCCGTTACGGGGAAGAGAAACTATACTTTCATGGATGCAGTTCAATCCATTCTTGGCGGGTATTATGATACGTTTTGTGGGGTAGTTCAGTACTCAAATCTTTACGGAACCGCTGTAGGATACACAATTGCAGCTTCTATTAGCATGATGGCGATAAAAAGGTCCAACTGTTTCCATTCTTCAGGCGTAAAAAATCCATGTCACGTTTCAAGCAACCCATACATGATCGGTTTTGGCATAATCCAAATTTTATTTTCTCAAATTCCAGATTTTCATAAAACATGGTGGCTCTCCATAGTTGCAGCAATCATGTCATTTGCCTATTCCACAATTGGCCTCGCTCTTGGAATTGCTAAAGTTGCAGAAACGGGTACTTTCAAGGGTAGTCTCACAGGAGTAAGGATTGGAACTGTGACTGAGGCCACAAAAGTATGGGGGGTTTTCCAAGGTCTTGGTGACATAGCCTTTGCCTACTCATATTCTCAAATCCTCATTGAAATTCAGGACACCATAAAATCACCACCATCTGAAGCAAAGACAATGAAGAAGTCTGCTAAGATAAGTATTGGAGTAACCACAACATTTTATATGCTTTGTGGCTTCATGGGCTATGCTGCTTTTGGAGATTCAGCTCCTGGGAACCTGCTCACAGGATTTGGTTTTTTTAACCCATATTGGCTCATAGATATTGCCAATGCTGCTATCGTAATTCACCTTGTGGGAGCATACCAAGTTTATGCCCAGCCACTCTTTGCCTTTGTGGAGAAATGGGCTTCAAAAAGATGGCCCGAAGTTGACACGGAATACAAAGTTCCAATTCCTGGTTTTTCACCTTACAATCTAAGCCCATTTAGATTAGTTTGGAGAACGGTGTTTGTTATCATAACCACTATTGTAGCAATGTTAATTCCATTCTTCAATGACGTTTTGGGACTTCTTGGAGCATTGGGGTTTTGGCCTTTAAGTGTTTTTCTCCCAGTGCAGATGAGTATCAAACAAAAGAGGACCCCTAGGTGGAGTAGTAGATGGATTGGTATGCAAATCTTAAGTGTTGTTTGTCTCATAGTATCAGTTGCAGCTGCTGTTGGCTCAGTTGCCAGTATCGTGCTTGACCTACAGAAATACAAACCGTTTCATGTAGACTATTAA 1461 0.4257 MVEKSSRTNLGHHQDFGMEAYSIDGVSSQSESKFYDDDGHVKRTGNVWTTSSHIITAVVGSGVLSLAWAMAQMGWVAGPVVMIFFSAVTLYTTSLLADCYRCGDPVTGKRNYTFMDAVQSILGGYYDTFCGVVQYSNLYGTAVGYTIAASISMMAIKRSNCFHSSGVKNPCHVSSNPYMIGFGIIQILFSQIPDFHKTWWLSIVAAIMSFAYSTIGLALGIAKVAETGTFKGSLTGVRIGTVTEATKVWGVFQGLGDIAFAYSYSQILIEIQDTIKSPPSEAKTMKKSAKISIGVTTTFYMLCGFMGYAAFGDSAPGNLLTGFGFFNPYWLIDIANAAIVIHLVGAYQVYAQPLFAFVEKWASKRWPEVDTEYKVPIPGFSPYNLSPFRLVWRTVFVIITTIVAMLIPFFNDVLGLLGALGFWPLSVFLPVQMSIKQKRTPRWSSRWIGMQILSVVCLIVSVAAAVGSVASIVLDLQKYKPFHVDY* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1762 486 Pfam Transmembrane amino acid transporter protein 44 473 IPR013057 -
Gso4g1762 486 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 16 480 - -
Gso4g1762 486 PANTHER OS05G0424000 PROTEIN-RELATED 16 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1762 Gso-Chr4 47737829 47744690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1762 22 486 Organic Solute Cotransporters AT5G09220 67.377 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1762 K24917 - gmx:100813602 980.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1762 4 47737829 47744690 Gso4g1762 4 47737829 47744690 ECH
Gso4g1762 4 47737829 47744690 Gso6g0989 6 9538315 9542505 GST
Gso4g1762 4 47737829 47744690 Gso6g1319 6 12924925 12931603 GST
Gso14g1212 14 28580652 28585261 Gso4g1762 4 47737829 47744690 PCT
Gso13g0160 13 10202345 10207211 Gso4g1762 4 47737829 47744690 PCT