Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1761 ATGGTAGAATATGCTTCGAGAACAAACCTTAGCTACTGTCGAGATTATGACATTGAGGAGGACTCCATGGATGGCATGCCTTTAAAAAGTGATCCTGAATGCTATGACGATGATGGCCGTCTTAAACGAACAGGGACCATTTGGACTACAAGCTCCCACATAATAACAGCTGTGGTAGGATCTGGGGTGCTCTCCTTAGCCTGGGCAATAGCTCAGATGGGTTGGATTGCTGGTCCTGCAGTGATGATCTTATTCAGCATAGTCACTTTGTATACTTCATCATTTCTAGCTGATTGTTATCGTACTGGTGACCCCATATTCGGGAAGAGAAATTATACTTTCATGGATGCAGTTAGCACCATTCTGGGCGGGTACAGTGTTACGTTTTGTGGGATAGTTCAGTACTTAAATCTTTTCGGAAGTGCGATAGGATACACAATTGCGGCTTCCCTTAGCATGAAGGCAATCCAAAGGTCTCACTGTATCATCCAATTCTCTGATGGAGAAAACCAATGTCATATTCCAAGTATCCCATACATGATCGGTTTTGGTGCAGTGCAAATTTTCTTTTCTCAAATTCCAGATTTTCATAACATGTGGTGGCTCTCAATAGTTGCTTCAGTCATGTCTTTCACCTATTCCATAATTGGTCTCGTTCTTGGAGTTACCAAAATTGCAGAAACGGGAACTTTCAAGGGTAGCCTCACTGGAATAAGCATTGGAACTGTGACAGAGGCCCAAAAAGTATGGGGTGTTTTCCAAGCTCTTGGTAACATAGCCTTCGCCTATTCATATTCTTTCGTTCTCCTTGAAATTCAGGATACCATCAAATCTCCACCATCTGAAGTAAAAACAATGAAGAAGGCTGCAAAATTAAGTATTGCAGTGACCACAACATTTTATATGCTTTGTGGCTGCGTAGGCTATGCTGCTTTTGGGGATTCAGCACCTGGGAACCTGCTTGCTGGATTTGGTTTCCATAAACTATATTGGCTTATAGATATTGCTAATGCTGCTATTGTAATTCACCTTGTGGGGGCATACCAAGTGTATGCTCAACCCCTCTTTGCATTTGTCGAGAAGGAGGCAGCAAAAAGATGGCCCAAAATTGACAAGGAATTCCAAATTTCAATTCCCGGTTTGCAATCCTACAATCAGAACGTATTTAGCCTAGTTTGGAGGACAGTGTTTGTGATCATAACCACTGTTATATCAATGTTGCTTCCATTCTTCAATGATATTTTGGGAGTGATTGGAGCATTGGGGTTTTGGCCTCTAACGGTGTACTTTCCTGTGGAGATGTATATCTTGCAAAAGAGGATCCCAAAATGGAGTATGAGATGGATTTCCCTGGAATTGCTGAGTGTGGTGTGCCTCATAGTAACAATTGCGGCTGGTCTTGGCTCAATGGTTGGTGTCTTGCTTGATCTCCAGAAATACAAACCATTCAGTTCAGATTATTAA 1464 0.4208 MVEYASRTNLSYCRDYDIEEDSMDGMPLKSDPECYDDDGRLKRTGTIWTTSSHIITAVVGSGVLSLAWAIAQMGWIAGPAVMILFSIVTLYTSSFLADCYRTGDPIFGKRNYTFMDAVSTILGGYSVTFCGIVQYLNLFGSAIGYTIAASLSMKAIQRSHCIIQFSDGENQCHIPSIPYMIGFGAVQIFFSQIPDFHNMWWLSIVASVMSFTYSIIGLVLGVTKIAETGTFKGSLTGISIGTVTEAQKVWGVFQALGNIAFAYSYSFVLLEIQDTIKSPPSEVKTMKKAAKLSIAVTTTFYMLCGCVGYAAFGDSAPGNLLAGFGFHKLYWLIDIANAAIVIHLVGAYQVYAQPLFAFVEKEAAKRWPKIDKEFQISIPGLQSYNQNVFSLVWRTVFVIITTVISMLLPFFNDILGVIGALGFWPLTVYFPVEMYILQKRIPKWSMRWISLELLSVVCLIVTIAAGLGSMVGVLLDLQKYKPFSSDY* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1761 487 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 5 480 - -
Gso4g1761 487 Pfam Transmembrane amino acid transporter protein 43 473 IPR013057 -
Gso4g1761 487 PANTHER OS05G0424000 PROTEIN-RELATED 5 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1761 Gso-Chr4 47726936 47733998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1761 22 487 Organic Solute Cotransporters AT5G09220 67.872 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1761 K24917 - gmx:100817699 981.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1761 4 47726936 47733998 Gso6g1319 6 12924925 12931603 GST
Gso4g1761 4 47726936 47733998 Gso6g1320 6 12935554 12943457 GST
Gso4g1761 4 47726936 47733998 Gso14g1212 14 28580652 28585261 PCT
Gso4g1761 4 47726936 47733998 Gso13g0160 13 10202345 10207211 PCT